Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7270g00003 ATGTTTGAAGATGGAATGAATATCAAATGTCCTTCAGGAACGGGCATTGACCTAGGTTTCTTTGAGTTAGATAATCTTTCTCGGCCCTCACCCGGAGAAGATGTGTTTCCCCTTGTCATATGTGCTGAAACAAGTTTAAGAACTCCTTTGGCAGATGAAACTAGTAGTAATTCCGTGCCAGATGCATCCCCTCACATGCAAATAACTCAAGCTGTCTTAGAGAAAAGCAATGGCATTGGTCCTTTCCAGGTAAAAGTCCTTAGGCAGATTCTGTGGATTGATGATGTTCGTTATGAGCTTAGAGAGTTATATGGAATAGGAAGTTCAACAGCAGCAGATTTTGATGATAATGATCCTGGGAAGGAGTGTGTAATATGCATGACTGAACCCAAGGACACTCCTGTCTTACCCTGCCGACATATGTGTATGTGCGGTGAGCGTGCCAAAGCTTTGCGGGTTCAATCAGATTAA 471 0.4289 MFEDGMNIKCPSGTGIDLGFFELDNLSRPSPGEDVFPLVICAETSLRTPLADETSSNSVPDASPHMQITQAVLEKSNGIGPFQVKVLRQILWIDDVRYELRELYGIGSSTAADFDDNDPGKECVICMTEPKDTPVLPCRHMCMCGERAKALRVQSD 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7270g00003 156 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 108 154 IPR013083 -
Mupr7270g00003 156 PANTHER MAHOGUNIN 8 155 IPR045194 GO:0061630
Mupr7270g00003 156 Pfam Zinc finger, C3HC4 type (RING finger) 121 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7270g00003 Mupr-Chr7270 34048 35151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7270g00003 5 156 C3H Transcription Factor Family AT3G06140 57.792 5.24e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7270g00003 - - vra:106775674 251.906