Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7255g00003 ATGTCTTCTTTTCTTCTTTATCAACCAACCCACACCTTATTCTCCAACACCCAGTTCAAGGGTTCGCTCCGTGGCTTCTTGTGGCGACCCACTTACTCGTATGGTTCTCATGTTGAAAACAGAGCACGACCCATCAAAGCTTCGGTTGCTGCACCTCCATTTCCCCTGTTTCAGCCTCCTCAAGTTGATGAAGAGTCCTCGTCTGAGTTGGAGCCTGCAGATCCTGATTTCTACAAGATTGGTTATGTCCGAAGCATGCGAGCTTATGGAGTTCAGTTTAAAGAAGGGCCGGATGGTTTTGGTGTGTATGCTTCTAAAGATGTAGAGCCTCTTCGCCGAGCAAGGGTTATATTGGAAATTCCTCTTGAATTAATGTTAACCATAAGCAAGAAGCTCCCATGGATGTTTTTCCCTGATATAATTCCCTTGGATCATCCAATATTTGATATTATCAATTCAACAATTCCAGAGACAGATTGGGACCTAAGGTTAGCATGCCTTCTCCTATATTCATTTGACTGTGAAGGCAACTTTTGGCAATTGTATGGTGACTTCTTACCAAGCGCAGATGAGTGCTCTAGCTTACTTCTAGCTTCAGAGGAGGAACTTTTGGAGCTGCAGGATCCCAATCTTGCATCTACTATGAGAAAACAGCAACAAAGAGCCTTAGAATTCTGGGAGAATAACTGGCACAGTGACGCACCCCTTAAAATAAAGCGTCTTGCTCGTGATCATCAAAGGTTCATTTGGGCAGTAAGTATTGCTCAGTCACGATGTATTAACATGCAAACGAGAATTGGTGCTCTAAATCAAGAAGCAAATATGCTGATTCCTTATGCTGACATGCTGAACCATTCATTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAGAGCATTAGAAAAGGAGATGAGATGACAGTTAGTTACATGAGTTCGCAGAAGAATGACATGTTCATGCAAAGATACGGATTTTCATCACCTGTGAGTTGCTTACAATTGCAGAATCCTTGGGATATGATCAAATTCTCAGGCAATGCACGTATTCATTTGGATTCCTTCTTGTCAGTCTTCAATATATCTGGCCTTCCTGGAGAGTATTACCATAACAATAGTCTATCAAACACTGGAGATACTTTCGTTGATGGAGCAGTCATAGCTGCAGCACGAACATTGCCAACTTGGTCAGACAGGGATGTGCCTCCAATCCCTAGCATGGAAAAAAAGGCTGTGAAGGAGTTGCAAGATGAATGCCAAAAGATGCTCGCAGAGTTTGCTACAACCTCTAAGCAAGACCAGAAATTGCTAGATTCCATGACAGATGCTACGAGGACACTTCAAGCTGCAATAAAGTATAGATTGCACAGGAAATTGTTCATGGAGAAAGTTATCCAAGCATTGGAAATGTATCAAGAGCAAATACTGTTCTGA 1467 0.4219 MSSFLLYQPTHTLFSNTQFKGSLRGFLWRPTYSYGSHVENRARPIKASVAAPPFPLFQPPQVDEESSSELEPADPDFYKIGYVRSMRAYGVQFKEGPDGFGVYASKDVEPLRRARVILEIPLELMLTISKKLPWMFFPDIIPLDHPIFDIINSTIPETDWDLRLACLLLYSFDCEGNFWQLYGDFLPSADECSSLLLASEEELLELQDPNLASTMRKQQQRALEFWENNWHSDAPLKIKRLARDHQRFIWAVSIAQSRCINMQTRIGALNQEANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQSIRKGDEMTVSYMSSQKNDMFMQRYGFSSPVSCLQLQNPWDMIKFSGNARIHLDSFLSVFNISGLPGEYYHNNSLSNTGDTFVDGAVIAAARTLPTWSDRDVPPIPSMEKKAVKELQDECQKMLAEFATTSKQDQKLLDSMTDATRTLQAAIKYRLHRKLFMEKVIQALEMYQEQILF 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7255g00003 488 ProSiteProfiles SET domain profile. 78 323 IPR001214 GO:0005515
Mupr7255g00003 488 Coils Coil 423 443 - -
Mupr7255g00003 488 Gene3D - 386 486 IPR036464 -
Mupr7255g00003 488 SUPERFAMILY SET domain 98 338 IPR046341 -
Mupr7255g00003 488 CDD SET_LSMT 90 337 - -
Mupr7255g00003 488 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 67 458 - -
Mupr7255g00003 488 FunFam Plastid transcriptionally active 14 365 485 - -
Mupr7255g00003 488 Gene3D set domain protein methyltransferase, domain 1 83 337 - -
Mupr7255g00003 488 Pfam SET domain 99 322 IPR001214 GO:0005515
Mupr7255g00003 488 FunFam Protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 83 337 - -
Mupr7255g00003 488 Pfam Rubisco LSMT substrate-binding 417 469 IPR015353 -
Mupr7255g00003 488 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 361 481 IPR036464 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mupr7255g00003 SET 1.1e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7255g00003 - - gmx:100790985 892.108