Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7251g00002 ATGTCAACACTGAACCATCTTTTTGATCTTCCTGAACAGATATGTTACGTACAATGTGGATACTGTACGACAATATTAATGGTAATGAGTTCTCTAGAGCTGCATGCTGTACTGAAGGTTGATGTGGTGGTAAGCGTGCCATGCAGCAGTTTGTCGATGGTCGTGACAGTCAGATGTGGCCACTGCACAAGCCTCCTCTCTGTTAATATGATGAAAGCTTCCTTTGTCCCTTTCCACCTTCTAGCTTCCCTTACTCATGTTGAGCCAAAAGAAGGTAATTCAGAAGATGGTGCAAACAAGACTTTGAACAACTATAATGCATCCATAATGACCTATTCTGACTGTGAGGAAGAGAACGTGACTCAAATGACCAATGTCGTGAATAAACCCCCAGAGAAGAGACAAAGAACACCATCTGCTTATAACCGCTTCATCAAAGAAGAGATTAAAAGGCTAAAGGCTGAAAACCCTAACATGGCCCACAAGGAGGCTTTCAGCACTGCGGCTAAAAATTGGGCCAATTTCCCCCCTTCTCAGTGTAAAGGAGATGCAGACAGCTGTAACCGGACAGAGCAACTTGTGGATCTAGACTCCAATGAAGAGCCTCGTGATGCTATTCAGGTCAATAAAGAAGGCCAAGGTTTCCGTGGAAGAAAGGTTCCAAGGAATTCTATCTGGGCAAGGACACCTTTTGAG 696 0.4411 MSTLNHLFDLPEQICYVQCGYCTTILMVMSSLELHAVLKVDVVVSVPCSSLSMVVTVRCGHCTSLLSVNMMKASFVPFHLLASLTHVEPKEGNSEDGANKTLNNYNASIMTYSDCEEENVTQMTNVVNKPPEKRQRTPSAYNRFIKEEIKRLKAENPNMAHKEAFSTAAKNWANFPPSQCKGDADSCNRTEQLVDLDSNEEPRDAIQVNKEGQGFRGRKVPRNSIWARTPFE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7251g00002 232 PANTHER PROTEIN YABBY 6-RELATED 2 191 IPR006780 GO:0007275
Mupr7251g00002 232 Gene3D High mobility group box domain 121 185 IPR036910 -
Mupr7251g00002 232 FunFam Axial regulator YABBY 4 123 190 - -
Mupr7251g00002 232 MobiDBLite consensus disorder prediction 211 232 - -
Mupr7251g00002 232 SUPERFAMILY HMG-box 123 179 IPR036910 -
Mupr7251g00002 232 CDD HMG-box_SF 136 179 - -
Mupr7251g00002 232 Pfam YABBY protein 11 178 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7251g00002 Mupr-Chr7251 13296 15920 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7251g00002 2 232 C2C2-YABBY Transcription Factor Family AT1G23420 54.098 8.03e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mupr7251g00002 YABBY 1e-53 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7251g00002 K25796 - gmx:100803001 381.333