Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7251g00001 ATGGAATGTAACCTAACCGTGATCATTGCTTTTTCCGATAGGACTAAAATATCATTATACAAAGTATATGGGGGTATTCTTACATCAAGCATCACAGTACGTGACCAAATTTCAGCCTCCCTAACTGTTAGAAAGATGTCTAGCAGGAGGTCACGGTCAAGGCAAACAAGTAGTTCAAGGAATATTACCGACGACCAGATCAATGATCTTGTCTCCAAGTTGCAACAGCTTCTTCCAGAGATTCAAGATAGGCGCTCTGACAAGTTCCACCAGAGAACTTCTGCTTCTTTATGTGTTTCAGCTTCCAAGGTGTTGCAAGAGACCTGCAATTATATTAGAAGCTTACACAGGGAAGTGGATGACCTAAGCGAGCGCTTATCTGAGCTCTTGGCTACAACTGACACGGCACAGGCTGCAATAATTAGAAATTTACTTATGCAATAG 444 0.4189 MECNLTVIIAFSDRTKISLYKVYGGILTSSITVRDQISASLTVRKMSSRRSRSRQTSSSRNITDDQINDLVSKLQQLLPEIQDRRSDKFHQRTSASLCVSASKVLQETCNYIRSLHREVDDLSERLSELLATTDTAQAAIIRNLLMQ 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7251g00001 147 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 51 115 IPR011598 GO:0046983
Mupr7251g00001 147 Coils Coil 112 132 - -
Mupr7251g00001 147 CDD bHLH_AtPRE_like 62 132 - -
Mupr7251g00001 147 Gene3D - 64 143 IPR036638 GO:0046983
Mupr7251g00001 147 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 133 IPR036638 GO:0046983
Mupr7251g00001 147 PANTHER TRANSCRIPTION FACTOR PRE 46 146 IPR044293 GO:0006355|GO:0040008|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7251g00001 Mupr-Chr7251 1734 4104 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7251g00001 46 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 65.049 1.14e-35 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7251g00001 - - gmx:100527636 153.68