Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7232g00002 ATGAAGGTTGATATATCAAAATTAAACTCTTACTTCTTCGTCTTCTTCACCCATAACTATTTCGTGTTTATCACGGTCAGCGAAACTAGTGCAGTTAACTTGGCCTCTATTGAATGCTTGAGGAGAACCAGAACCATGAATCAACTTGGTGTTATCTTTTTGGTTCTCTCAATCTTATTCCTCCATCATGTTAGAGCACAAACAGCACCTTCAGGAGATGCTGTCTCCAATTTCCAACCAAGCCTTGGTGTTGTCATAGGAATCCTTGGTGTCATGTTCTTGCTAACATTCTTTCTTCTCATGTATGCAAAATTCTGTCAACGCCGTCGCGCTTCAGCTGCTGTTGTGGACCAAGAAAACCAACCAACTCTTGTGAGATCAAGGTCTAGATTCTCAGGAATTGACAAGATTGTTATAGAATCACTCCCCTTCTTTAGATTCTCTTCACTCAAAGGGTCCAAGGAAGGGCTGGAGTGTTCAGTGTGCTTGTCAAAGTTTGAAGATGTTGAAATTCTCAGACTCCTACCAAAGTGCAAGCATGCTTTTCATATTGATTGCATAGACCATTGGCTTGAAAAGCACTCTAGCTGTCCTATTTGTAGGCACAAGGTCAATCCTGAGGACCACACAACCTTCACATATTCAAACAGTTTAAGGAGGCTAGCAAACCAATCAGGGGTAGGTGAAGAATCTAACATAGAGATCTTTGTCCAGAGAGAGGAAGAGCATCATGGTTCATCAAGATTCAGTGTTGGAAGCAGCTTTAGGAAAACGGGAAAGGGTGTCAAGGAAGAAGAATTGCTCATCCTAAAAGGAGCTGAAGATAGTGATGGTAACCAGAAGGGGTATCACAAACACAACCATAGGATCACTATATCTGATGTTGTGTTCAAGCACAGGTGGAGCAACGTGAGTTCTTCAGACCTTATGTTTTTGAATTCGGAGATGCTGAATGCTACCTCAAGCCAAAGATTCAGTGACTTGGAATCAAATGCTGACATGGTGTCAACTACAAGAGGAGTGGTGGAAAGTGAGCAAATTATGAACATCAAGGAGGAGATGGAGAGGAAGATTTCCTTTGAGAGTAAAGTTGGTGCGCTAAACAACATCAAATCAGTTTCAGATAAGGGTCCTCCTTTTACATCAGATTCTGCAGGAAAATCAAGTCATGCACCAAAGTATGTGAGCCCGGGTGAGAAAAGGTCAATGTCAGAAATCACTGCTGTTTCTAGATTTGGAGATTTAGGCAAGAAAATGAGGGTCTTTAAGGATTCTTCTTCCCTTCAAAATAACCTTAAAGAGGAAAGAATGAGGCAGATTTGGTTACCAATTGCTAAAAGAACAGCTCAATGGTTTGTGAATAGAGAAAGAAGGTCTCAGCAATCTCTGAATAAACAACAACCATTAGATGTATAA 1416 0.4096 MKVDISKLNSYFFVFFTHNYFVFITVSETSAVNLASIECLRRTRTMNQLGVIFLVLSILFLHHVRAQTAPSGDAVSNFQPSLGVVIGILGVMFLLTFFLLMYAKFCQRRRASAAVVDQENQPTLVRSRSRFSGIDKIVIESLPFFRFSSLKGSKEGLECSVCLSKFEDVEILRLLPKCKHAFHIDCIDHWLEKHSSCPICRHKVNPEDHTTFTYSNSLRRLANQSGVGEESNIEIFVQREEEHHGSSRFSVGSSFRKTGKGVKEEELLILKGAEDSDGNQKGYHKHNHRITISDVVFKHRWSNVSSSDLMFLNSEMLNATSSQRFSDLESNADMVSTTRGVVESEQIMNIKEEMERKISFESKVGALNNIKSVSDKGPPFTSDSAGKSSHAPKYVSPGEKRSMSEITAVSRFGDLGKKMRVFKDSSSLQNNLKEERMRQIWLPIAKRTAQWFVNRERRSQQSLNKQQPLDV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7232g00002 471 Pfam Ring finger domain 158 201 IPR001841 -
Mupr7232g00002 471 SMART ring_2 159 200 IPR001841 -
Mupr7232g00002 471 FunFam RING-H2 finger protein ATL43 134 208 - -
Mupr7232g00002 471 MobiDBLite consensus disorder prediction 371 402 - -
Mupr7232g00002 471 ProSiteProfiles Zinc finger RING-type profile. 159 201 IPR001841 -
Mupr7232g00002 471 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 68 457 - -
Mupr7232g00002 471 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 133 210 IPR013083 -
Mupr7232g00002 471 MobiDBLite consensus disorder prediction 371 389 - -
Mupr7232g00002 471 SUPERFAMILY RING/U-box 138 207 - -
Mupr7232g00002 471 CDD RING-H2_EL5-like 158 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7232g00002 Mupr-Chr7232 18903 21765 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7232g00002 52 467 C3H Transcription Factor Family AT4G28890 49.441 6.42e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7232g00002 K10664 - gmx:100803207 725.702