Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7224g00004 ATGTGCCCGTTGCGTATGTTGATTGTTTGGGACGACTTTGATGAACAAATGCAAATATTCGTTAAAACCCTCACTGGTAAGACCATCACTCTCGAAGTAGAGAGTTCAGATACCATAGACAATGTGAAGGCCAAGATTCAAGACAAGGAAGGGATTCCACCAGACCAGCAACGTCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCTGATTACAACATCCAAAAGGAGTCCACACTTCATTTGGTGCTCCGACTTCGTGGTGGAATGCAAATATTTGTTAAAACCTTGACTGGAAAGACAATCACCCTTGAGGTGGAGAGCTCTGACACAATTGACAATGTCAAAGCCAAGATTCAGGATAAAGAGGGTATCCCTCCAGACCAACAGAGGCTCATCTTTGCTGGGAAACAGCTTGAAGATGGCAGAACCTTGGCTGATTACAACATTCAGAAGGAATCCACCCTCCATTTGGTGCTCCGTCTCCGTGGTGGTATGCAAATCTTCGTCAAGACACTCACAGGAAAGACCATCACCCTTGAGGTGGAGAGCTCTGACACCATAGACAATGTCAAGGCTAAGATTCAAGACAAAGAGGGTATCCCACCAGACCAACAGAGGCTCATCTTTGCTGGAAAGCAGCTTGAAGATGGCCGAACCTTGGCTGATTACAACATTCAGAAGGAATCTACCCTCCACTTGGTGCTTCGTCTCCGTGGTGGGATGCAAATCTTCGTCAAGACACTCACAGGAAAGACTATCACCCTTGAGGTGGAGAGCTCTGACACTATAGACAATGTTAAAGCTAAGATTCAGGACAAAGAGGGCATCCCACCAGACCAACAAAGGCTCATCTTTGCTGGAAAGCAACTTGAGGATGGCCGTACCCTTGCTGATTACAACATTCAGAAAGAGTCCACTCTCCACTTGGTGCTGCGTCTTCGTGGTGGTATGCAAATCTTTGTCAAGACCCTCACAGGAAAGACCATTACCCTTGAGGTGGAGAGCTCTGACACCATAGACAATGTTAAGGCCAAGATTCAAGACAAAGAGGGTATCCCACCAGATCAACAGAGGCTCATATTTGCTGGAAAACAGCTTGAAGATGGCCGAACCTTGGCAGATTACAACATTCAGAAAGAGTCAACTCTCCACCTCGTCCTGCGACTCCGTGGTGGTATGCAGATTTTTGTGAAGACCTTGACTGGAAAGACAATTACCTTAGAGGTAGAGAACTCAGACACAATTGACAATTTAAAGGCAAAGATCCAGGAGGGTATTCCTCCAAACCAGCAAAGGTTGATTTTTGCTGGAAAGCAACTTGAAGAAGCACGTATTACAATAATCAGAAAGAACCCATCCTTCACCTTGTTCTACATCTCAGGGGAGAAGCGAAGGTCATGCATGATGTTGTCCTTGACTGCTGATGACTGCTGA 1446 0.462 MCPLRMLIVWDDFDEQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVENSDTIDNLKAKIQEGIPPNQQRLIFAGKQLEEARITIIRKNPSFTLFYISGEKRRSCMMLSLTADDC 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7224g00004 481 CDD Ubl_ubiquitin 321 396 - -
Mupr7224g00004 481 SUPERFAMILY Ubiquitin-like 320 396 IPR029071 -
Mupr7224g00004 481 SUPERFAMILY Ubiquitin-like 12 92 IPR029071 -
Mupr7224g00004 481 ProSitePatterns Ubiquitin domain signature. 43 68 IPR019954 -
Mupr7224g00004 481 FunFam Polyubiquitin 3 169 244 - -
Mupr7224g00004 481 PRINTS Ubiquitin signature 27 47 IPR019956 -
Mupr7224g00004 481 PRINTS Ubiquitin signature 48 68 IPR019956 -
Mupr7224g00004 481 PRINTS Ubiquitin signature 69 90 IPR019956 -
Mupr7224g00004 481 SUPERFAMILY Ubiquitin-like 396 447 IPR029071 -
Mupr7224g00004 481 Gene3D - 245 320 - -
Mupr7224g00004 481 Gene3D - 93 168 - -
Mupr7224g00004 481 Gene3D - 169 244 - -
Mupr7224g00004 481 Gene3D - 11 92 - -
Mupr7224g00004 481 Gene3D - 321 396 - -
Mupr7224g00004 481 FunFam Polyubiquitin-C 397 428 - -
Mupr7224g00004 481 SUPERFAMILY Ubiquitin-like 168 244 IPR029071 -
Mupr7224g00004 481 ProSitePatterns Ubiquitin domain signature. 271 296 IPR019954 -
Mupr7224g00004 481 SMART ubq_7 17 88 IPR000626 GO:0005515
Mupr7224g00004 481 SMART ubq_7 321 392 IPR000626 GO:0005515
Mupr7224g00004 481 SMART ubq_7 93 164 IPR000626 GO:0005515
Mupr7224g00004 481 SMART ubq_7 397 464 IPR000626 GO:0005515
Mupr7224g00004 481 SMART ubq_7 169 240 IPR000626 GO:0005515
Mupr7224g00004 481 SMART ubq_7 245 316 IPR000626 GO:0005515
Mupr7224g00004 481 FunFam Polyubiquitin 3 245 320 - -
Mupr7224g00004 481 CDD Ubl_ubiquitin 17 92 - -
Mupr7224g00004 481 SUPERFAMILY Ubiquitin-like 243 320 IPR029071 -
Mupr7224g00004 481 CDD Ubl_ubiquitin 169 244 - -
Mupr7224g00004 481 ProSitePatterns Ubiquitin domain signature. 119 144 IPR019954 -
Mupr7224g00004 481 ProSitePatterns Ubiquitin domain signature. 347 372 IPR019954 -
Mupr7224g00004 481 SUPERFAMILY Ubiquitin-like 92 168 IPR029071 -
Mupr7224g00004 481 FunFam Polyubiquitin 3 93 168 - -
Mupr7224g00004 481 FunFam Polyubiquitin 3 321 396 - -
Mupr7224g00004 481 Gene3D - 397 445 - -
Mupr7224g00004 481 ProSiteProfiles Ubiquitin domain profile. 321 396 IPR000626 GO:0005515
Mupr7224g00004 481 ProSitePatterns Ubiquitin domain signature. 195 220 IPR019954 -
Mupr7224g00004 481 CDD Ubl_ubiquitin 93 168 - -
Mupr7224g00004 481 ProSiteProfiles Ubiquitin domain profile. 397 446 IPR000626 GO:0005515
Mupr7224g00004 481 ProSiteProfiles Ubiquitin domain profile. 93 168 IPR000626 GO:0005515
Mupr7224g00004 481 ProSiteProfiles Ubiquitin domain profile. 17 92 IPR000626 GO:0005515
Mupr7224g00004 481 CDD Ubl_ubiquitin 245 320 - -
Mupr7224g00004 481 Pfam Ubiquitin family 399 447 IPR000626 GO:0005515
Mupr7224g00004 481 Pfam Ubiquitin family 323 394 IPR000626 GO:0005515
Mupr7224g00004 481 Pfam Ubiquitin family 171 242 IPR000626 GO:0005515
Mupr7224g00004 481 Pfam Ubiquitin family 19 90 IPR000626 GO:0005515
Mupr7224g00004 481 Pfam Ubiquitin family 247 318 IPR000626 GO:0005515
Mupr7224g00004 481 Pfam Ubiquitin family 95 166 IPR000626 GO:0005515
Mupr7224g00004 481 ProSiteProfiles Ubiquitin domain profile. 245 320 IPR000626 GO:0005515
Mupr7224g00004 481 PANTHER UBIQUITIN 397 448 - -
Mupr7224g00004 481 FunFam Polyubiquitin 3 17 92 - -
Mupr7224g00004 481 ProSiteProfiles Ubiquitin domain profile. 169 244 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7224g00004 Mupr-Chr7224 21464 24388 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7224g00004 17 93 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 98.701 1.46e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7224g00004 K08770 - psom:113311590 822.772