Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7224g00001 ATGTGTTCAAAAATCAGATTCATTCCAGATGTGGTTGCAACGTTTATCATCTCATTGGTTGCCCAAAAAAGACACAACAGGGTTCACGGTCTAATTTCATCCACGTTTCACAATGTGATTGGAAGAGGTGCCGGTGCCGTGACTAAGCAACGCCAGAGAAAGAAAACCCCAAAGCACCGCTTCAAGATGCAAATTTTTGTTAAGACCCTCACTGGTAAGACCATCACTCTCGAAGTGGAGAGTTCAGATACCATTGACAATGTGAAGGCCAAGATTCAGGACAAGGAAGGGATCCCACCAGACCAGCAACGTCTCATTTTTGCTGGCAAGCAGCTTGAGGATGGCCGTACCCTTGCTGATTACAACATTCAAAAGGAGTCCACTCTTCATTTGGTGCTCCGACTTCGTGGTGGAATGCAAATATTTGTTAAAACCTTGACTGGAAAGACAATCACCCTTGAGGTGGAGAGCTCTGACACCATCGACAATGTCAAAGCCAAGATTCAGGATAAAGAAGGTATCCCTCCAGACCAACAGAGGCTCATCTTTGCTGGGAAGCAGCTTGAAGATGGCCGAACCTTGGCTGATTACAATATCCAGAAGGAATCTACCCTCCACTTGGTGCTCCGTCTCCGTGGTGGAATGCAAATCTTTGTTAAAACCTTGACTGGAAAGACTATCACCCTTGAGGTGGAGAGTTCTGACACTATAGACAATGTCAAAGCCAAAATTCAAGACAAAGAGGGCATCCCACCAGACCAACAGAGGCTCATTTTTGCTGGGAAACAGCTTGAGGATGGCCGTACCTTGGCAGATTATAACATCCAGAAAGAGTCAACTCTTCACCTTGTCCTGCGACTTCGTGGTGGTATGCAGATTTTTGTGAAGACCCTGACTGGAAAGACAATTACTTTAGAGGTGGAGAGTTCAGACACAATTGACAATGTAAAGGCAAAGATCCAGGACAAGGAGGGTATTCCTCCAGACCAGCAAAGGTTGATTTTTGCTGGAAAGCAGCTTGAAGATGGACGAACTTTGGCAGACTACAATATTCAGAAGGAGTCCACTCTTCACCTTGTTCTTCGTCTGAGGGGAGGTATGCAGATCTTTGTGAAGACTTTGACAGGAAAAACTATTACCTTAGAGGTTGAAAGTTCAGACACAATCGATAATGTGAAGGCAAAAATCCAGGACAAGGAGGGAATCCCACCAGACCAGCAGAGGTTGATCTTTGCTGGGAAACAATTGGAGGATGGAAGGACTCTTGCTGACTACAACATTCAAAAAGAGTCTACTCTTCACCTTGTTTTGCGACTTCGTGAAAATCTCCAAATGGAGAAGTACAGAACCACGTACATGATCGATCTTTTCCCACGCATATTACTTGCATTACAACAAAGTAAAGCACACAATTTAAAACAAACAAACAAACAAACAAAAAGAAGGCAAAGATCAACAACAATTTGCTTTTGCTTAACCAGAGATTTGTATGGTCTTAACATCAGGGTTCTTGGGCTCTTTCTTGGGAACAGTAACGGTGAGAACCCCATTTTCCATAGAAGCCTTCACTTGATGCACTTTGGCATTCTCTGGCAATCTGAACCTCCTGGTGAACTTGCCACTGCTTCGCTCGACGTGGTGCCACGTGTCCTTTTTATCTTCCTTCTAAACGCTCCTCTCCCCGCTGATCTGAAGAACCCTATCATCTTCAATGTGTACCTTTACTTCCTCCTTCTTGACCCCAGGAACATCAGCCTTGAACACGTGCGCTTCTGGGGTCTCCTTCCAATCCACTTTCGTGCTCACAAATGCAGAGTTTTCATCAGAGACACAATTTGTGAAAGAAATATCCTTGAAGGGATCCCACACGTCCAGGGACAAAGGATCCAACACGGACTCGCCAGATTCACTTTATGA 1917 0.4481 MCSKIRFIPDVVATFIISLVAQKRHNRVHGLISSTFHNVIGRGAGAVTKQRQRKKTPKHRFKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRENLQMEKYRTTYMIDLFPRILLALQQSKAHNLKQTNKQTKRRQRSTTICFCLTRDLYGLNIRVLGLFLGNSNGENPIFHRSLHLMHFGILWQSEPPGELATASLDVVPRVLFIFLLNAPLPADLKNPIIFNVYLYFLLLDPRNISLEHVRFWGLLPIHFRAHKCRVFIRDTICERNILEGIPHVQGQRIQHGLARFTL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7224g00001 638 PANTHER UBIQUITIN 291 368 - -
Mupr7224g00001 638 CDD Ubl_ubiquitin 63 138 - -
Mupr7224g00001 638 SUPERFAMILY Ubiquitin-like 290 366 IPR029071 -
Mupr7224g00001 638 ProSitePatterns Ubiquitin domain signature. 393 418 IPR019954 -
Mupr7224g00001 638 CDD Ubl_ubiquitin 215 290 - -
Mupr7224g00001 638 FunFam Polyubiquitin 3 291 366 - -
Mupr7224g00001 638 PRINTS Ubiquitin signature 73 93 IPR019956 -
Mupr7224g00001 638 PRINTS Ubiquitin signature 94 114 IPR019956 -
Mupr7224g00001 638 PRINTS Ubiquitin signature 115 136 IPR019956 -
Mupr7224g00001 638 ProSiteProfiles Ubiquitin domain profile. 367 442 IPR000626 GO:0005515
Mupr7224g00001 638 ProSitePatterns Ubiquitin domain signature. 165 190 IPR019954 -
Mupr7224g00001 638 CDD Ubl_ubiquitin 367 441 - -
Mupr7224g00001 638 SUPERFAMILY Ubiquitin-like 62 138 IPR029071 -
Mupr7224g00001 638 ProSiteProfiles Ubiquitin domain profile. 291 366 IPR000626 GO:0005515
Mupr7224g00001 638 ProSitePatterns Ubiquitin domain signature. 89 114 IPR019954 -
Mupr7224g00001 638 Pfam Ubiquitin family 141 212 IPR000626 GO:0005515
Mupr7224g00001 638 Pfam Ubiquitin family 369 440 IPR000626 GO:0005515
Mupr7224g00001 638 Pfam Ubiquitin family 217 288 IPR000626 GO:0005515
Mupr7224g00001 638 Pfam Ubiquitin family 65 136 IPR000626 GO:0005515
Mupr7224g00001 638 Pfam Ubiquitin family 293 364 IPR000626 GO:0005515
Mupr7224g00001 638 SUPERFAMILY Ubiquitin-like 214 290 IPR029071 -
Mupr7224g00001 638 Coils Coil 462 482 - -
Mupr7224g00001 638 CDD Ubl_ubiquitin 139 214 - -
Mupr7224g00001 638 ProSiteProfiles Ubiquitin domain profile. 139 214 IPR000626 GO:0005515
Mupr7224g00001 638 FunFam Polyubiquitin 3 215 290 - -
Mupr7224g00001 638 ProSitePatterns Ubiquitin domain signature. 317 342 IPR019954 -
Mupr7224g00001 638 ProSiteProfiles Ubiquitin domain profile. 63 138 IPR000626 GO:0005515
Mupr7224g00001 638 CDD Ubl_ubiquitin 291 366 - -
Mupr7224g00001 638 ProSiteProfiles Ubiquitin domain profile. 215 290 IPR000626 GO:0005515
Mupr7224g00001 638 ProSitePatterns Ubiquitin domain signature. 241 266 IPR019954 -
Mupr7224g00001 638 FunFam Polyubiquitin 3 63 138 - -
Mupr7224g00001 638 SMART ubq_7 63 134 IPR000626 GO:0005515
Mupr7224g00001 638 SMART ubq_7 139 210 IPR000626 GO:0005515
Mupr7224g00001 638 SMART ubq_7 215 286 IPR000626 GO:0005515
Mupr7224g00001 638 SMART ubq_7 291 362 IPR000626 GO:0005515
Mupr7224g00001 638 SMART ubq_7 367 438 IPR000626 GO:0005515
Mupr7224g00001 638 FunFam Polyubiquitin 3 367 442 - -
Mupr7224g00001 638 Gene3D - 215 290 - -
Mupr7224g00001 638 Gene3D - 367 454 - -
Mupr7224g00001 638 Gene3D - 139 214 - -
Mupr7224g00001 638 Gene3D - 54 138 - -
Mupr7224g00001 638 Gene3D - 291 366 - -
Mupr7224g00001 638 FunFam Polyubiquitin 3 139 214 - -
Mupr7224g00001 638 SUPERFAMILY Ubiquitin-like 138 214 IPR029071 -
Mupr7224g00001 638 SUPERFAMILY Ubiquitin-like 365 441 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7224g00001 Mupr-Chr7224 4551 9178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7224g00001 367 440 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 100.000 2.23e-43 150