Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7220g00001 ATGGCAATCCAGCAGCACCACAATGAAGAACTAGAACATAATGAAAATGTCTCATCTGTCCTTGATGCCCTTTACTGTGATGAAGAAAAGTGGGAAGAGGAAGAGGAAGAGGAAGACGAAGAGGAAGACAATGAAGAAGTAAGTGATGTGACAACAAACAATGATGATGGGGTGCACCACACTGGAACTTCTCTTTCCCCTCTCCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGATGAAGAGCTAAACTCTCTCTTTTCCAAAGAGAAGATTCAACAAGAAGAAGCATATGGCTATGAATATAACAATCTGAACAGTGTTGATAATAATAATAATAATAATAATAATAATAATGTGCATTTGGAATGTTATCTCTTTGAGCCTCGTCGTGAGGCAGTGGAATGGATGCTTAAAGTCAATGCGCATTATGGATTCTCTGCTCTGACTGCAACACTGGCTGTTACTTACCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGGGAGAAGCCTTGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCTGCAAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGATCTTCAAGTGCAAGACACAAAATATGTGTTTGAGGCAAAGACTATTCAGAGAATGGAGCTGCTGGTGCTGTCCACCCTCAAATGGAAGATGCACCCCGTCACCCCACTCTCTTTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTCATCTTCACTGGGAGTTTCTCAGGCGCTGCGAGCATCTTCTTCTGGCTCTGCTTTTAGATTCAAAATTTGTTGGGTGTCTTCCTTCTGTGCTGGCCACTGCCACAATGCTGCATGTTATAGACCAAATTGAGCACAGTGGTGGAATGGAATACAAAAATCAGCTTCTGAATGTTCTAAAAATTAGCAAGGTTAGTGCACAAGAGAAAGTAGATGAATGTTATAATGGCATTCTCCAAGTCTCAAATGGCAATAATAACAACAACACTAGGAAGCGCAAGTATGAGCAAATCCCAGGAAGCCCAAGTGGCGTAATCGATGCTGCATTTAGCTCTGATGATGGTTCCAACGATTCGTGGGCAGTGGGGTCGTCATTATATTCACCAGCAGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGACAACAAATGAAATTGTCACCACTTAACCGGGTCATTGTCGGAATTGTTGGCACCACTCCTTAA 1227 0.4254 MAIQQHHNEELEHNENVSSVLDALYCDEEKWEEEEEEEDEEEDNEEVSDVTTNNDDGVHHTGTSLSPLLLLEQDLFWEDEELNSLFSKEKIQQEEAYGYEYNNLNSVDNNNNNNNNNNVHLECYLFEPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLLALLLDSKFVGCLPSVLATATMLHVIDQIEHSGGMEYKNQLLNVLKISKVSAQEKVDECYNGILQVSNGNNNNNTRKRKYEQIPGSPSGVIDAAFSSDDGSNDSWAVGSSLYSPAEPLFKKSRTQGQQMKLSPLNRVIVGIVGTTP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7220g00001 408 Gene3D - 230 321 - -
Mupr7220g00001 408 MobiDBLite consensus disorder prediction 29 50 - -
Mupr7220g00001 408 Coils Coil 21 41 - -
Mupr7220g00001 408 CDD CYCLIN_AtCycD-like_rpt2 231 325 - -
Mupr7220g00001 408 SMART Cyclin_C_2 231 361 IPR004367 -
Mupr7220g00001 408 Pfam Cyclin, C-terminal domain 231 343 IPR004367 -
Mupr7220g00001 408 Pfam Cyclin, N-terminal domain 122 228 IPR006671 -
Mupr7220g00001 408 ProSitePatterns Cyclins signature. 129 160 IPR006671 -
Mupr7220g00001 408 FunFam CYCLIN D32 230 323 - -
Mupr7220g00001 408 MobiDBLite consensus disorder prediction 29 61 - -
Mupr7220g00001 408 SMART cyclin_7 134 222 IPR013763 -
Mupr7220g00001 408 CDD CYCLIN_AtCycD-like_rpt1 129 226 - -
Mupr7220g00001 408 Gene3D - 127 229 - -
Mupr7220g00001 408 SUPERFAMILY Cyclin-like 122 229 IPR036915 -
Mupr7220g00001 408 PANTHER CYCLINS 49 335 IPR039361 -
Mupr7220g00001 408 FunFam D3-type cyclin 122 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7220g00001 Mupr-Chr7220 8837 10449 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7220g00001 1 328 Core Cell Cycle Gene Families AT4G34160 52.134 2.59e-108 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7220g00001 K14505 - gmx:547740 586.645