Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr718g00006 ATGATGGAAGAGAGAAATGATGCTGAGAAACTTGATGAAGTTATGCTACCAGGGTTCCGGTTTCACCCAACTGACGAGGAGCTTGTTGGGTTTTACCTCAAGAGAAAGATTCAGCAACGCCCTTTGACTATTGAGCTCATCAAGCAGCTTGATATCTACAAATATGACCCTTGGGATCTTCCAAAGTTGGCTACCACAGGAGAGAAAGAGTGGTATTTCTACTGTCCCAGGGACAGAAAATACAGGAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGGTTCTGGAAAGCTACAGGGACTGATAGGCCTATCTACTCCTCAGAAGGTTCCAAGTGTATTGGCCTGAAGAAATCCTTAGTTTTTTACAAAGGTAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCATGAGTTCAGGCTACCTTCTCTAACAGATTCACTATCCCCAAAGTATATAGACAAGACCATTCCAGCTAATGAATCATGGGCTATCTGCAGGATATTCAAGAAAACCAATTCTACAGCTCAAAGAGCTTTATCTCACTCTTGGGTCTCTTCCCTACCTGAAACAAGAACCTCTGATCATATCCTAACAAAAGATCAAGACAGCACCCAGTTTTGTTCAGACAACATGCCACCGACAAAGAAAACTAGCTTAGCCAGCCAGTTTTGTACTAACAATTACAATGATGCACAACCCTTAACCACTACCACTAGTAGTACACTTTGTCCTGATGTTGCCTCATACAAATCCATTATTAACCCATTGCTTTACAAAGCCTTTGATCATTTACCCATTTCAAATGGAGACCTTAGCACTAGCTTGCTATTCTCATCTCCTTTTGACACATCAGATACTAACCCCAAATCTACAATGGACGTTTCTTCCATGTTGTTGAACATGTCATCCTCCGTGCTTGGAGATTTTAATAAGACTTCCGAGGATACAAATACAACTACAAACTTTGGCGTGTTGCAAGAGCACTGTAGTGGCTACCCAATACCATTTCTACGTGAGGTGCAAACCACATATGGTAACCACCAACAATATGATAATATTAATGCATTGGTAAAAGTTCCTAATGTGAATGTGCCTCGTGCTGAAGACCAAGAGTTGGAGACAGTACGATCCATTGGGTTTCCATTCTGTAGTGCTATGCCTTTCAATATTGGCGATGCATGGAAGTCAAATCTGCTTTGGGATACTTCCTCTTTTCCTTGTGATGTGCCATCTAGTTATTCCACAACCAAGTGCTATACTTAG 1269 0.4184 MMEERNDAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSLTDSLSPKYIDKTIPANESWAICRIFKKTNSTAQRALSHSWVSSLPETRTSDHILTKDQDSTQFCSDNMPPTKKTSLASQFCTNNYNDAQPLTTTTSSTLCPDVASYKSIINPLLYKAFDHLPISNGDLSTSLLFSSPFDTSDTNPKSTMDVSSMLLNMSSSVLGDFNKTSEDTNTTTNFGVLQEHCSGYPIPFLREVQTTYGNHQQYDNINALVKVPNVNVPRAEDQELETVRSIGFPFCSAMPFNIGDAWKSNLLWDTSSFPCDVPSSYSTTKCYT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr718g00006 422 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 238 - -
Mupr718g00006 422 FunFam NAC domain-containing protein 35 24 175 - -
Mupr718g00006 422 ProSiteProfiles NAC domain profile. 15 172 IPR003441 GO:0003677|GO:0006355
Mupr718g00006 422 SUPERFAMILY NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Mupr718g00006 422 Gene3D NAC domain 24 177 IPR036093 GO:0003677|GO:0006355
Mupr718g00006 422 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr718g00006 Mupr-Chr718 24366 26009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr718g00006 1 311 NAC Transcription Factor Family AT1G26870 57.012 1.20e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr718g00006 NAM 7.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr718g00006 - - gmx:100783995 718.768