LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr718g00005	ATGCATGTTTCCAATATATACTTTAAATATGAGGCTTTGGGTTGGAGGTTCTTCATACGTGATTTCTGTGAACGATTCATCTACTACTCAAGAATCTTCATCTTTGCTACGGCCACCATGATAAAGACAACAGCATCCTCGTCCTATACTGAGGAATGGGCTTACGACGTTTTTCTTAGTTTCCGAGGCGAGGACACGCACACGGGTTTCACCGGAAATCTTTACAACGCGTTGTGTGCAAAAGGAATCAACACGTTCATAGACGATCGAGAGCTTAAGAAAGGAGAGGAGATCACAGCGAGTTTGATGAGGGCAATTCGGGAATCTAGGATTGCCATTGTGATATTTTCACAAAACTACGCATGGTCAACGTTTTGTTTAGAAGAACTTGTGAAGATCATGGAGTGCTTAAAACACAAGGGCAGGTTGGTTTGGCCCGTTTTCTATAAAGTGGATCCATGTGATGTGCGGCACCAGAAAGGGACTTATGCAGAAGCACTTGTCAAACATGAAGGAAGAATAATGAATGAGAATGAGAAGGAGAAGGTGAAGAGGTGGAGGTTTGCTTTGCATAATGCAGCTAATCTATCTGGTTGGCATTTCCAACATGGGTATGAGTATGAGTATGAGTTTATTGGAAAGATCATTGAAGGGGTCTCTAAAAAAATCAATCGCATCCCTTTATACGTTGCTAATTACGCAGTTGGGTTAGAGTCTCGAGTGCAAAAAGTAAACTCACTTCTAGATGTTGAATCAAGTGATGGGGTTCATGTGATAGGGATTTATGGAATCGGTGGGATTGGCAAAACAACACTTGCATGTGCACTGTACAATTTAATTGCTGATCAATTTGAGAGTCTTTGTTTTCTTGCTGATGTTAGAAAAAATTCAATGAAGCATGGGTTGGTACAACTTCAGGAAACACTTCTTTCTGATTTAGTTGGAGAGAAAGACATCAAGTTGGGGAATGTAAATAAAGGAATTCCAATAGTTAAAAGGAGGCTCTTTCAAAAGAAAATTCTTCTGATTTTGGATGATGTTGATAAATTGGACCAAATAAAAGCACTTGCCGGTGGGCTTGATTGGTTTGGTTCTGGCAGCAAAATTGTCATAACAACAAGAGATAAGCACTTGCTATATGTTTGTGGTGTGGAAAGAACCTATGAAGTTGAAGGCTTAAATCATAAAGAAGCCTTTGAATTGTTTAGTTGTAATGCTTTCAAAAGAAAACAAGTTAAGCCTACTTATTTGGACGTTTCTAAGAGAGCAATACTTTATTCTGATGGCCTTCCATTGTCTTTGGAAATAATAGGTTCTGATTTGTATGGCAAAACAAAGTTGGAATGGAAATCTGCATTAGATTCTTTTGAAAAAATTCCTCATGAAAATATCCTTGACATCCTAAGAGTAAGTTATGATGGCTTAAAGGAATTTGAGAAGGAAATTTTTTTAGACATAGCTTGTTTCTTTAAAGGGTACTACCTAAGTGATGTCATAAACATACTATGTAGTGGTCGTGGCTCTACCCCAGAGTATGGAATTCAGGTGTTGATTGATAAATGTCTCATAAAAATTGATCAACATCGTGTGAGAATGCATGATTTGATTGAGGATATGGGTAGAGAGATTGTTCGGCTGGAATCACCCTCAAAACCAGGTGAACGTAGTAGATTATGGTTTGCTAAAGATATTCTTCATGTTTTCAAAGAGAACAAGGGATCTGATAAAATTGAGATCATCATGCTACATCTGCTCAAAGATAAAGAAGTGCAATGGGATGGAAGTGCATTGATGAAGATGGAAAACCTCAAAATACTTATTGTAGAAAATGCTCGCTTTTCAAGAGGACCTAACGATCTCCCAAAAAGTTTAAGAGTGTTAAAATGGCGCGAATACCCTGAACCATTGTTGCCTTCAAATTTTGATCCAAAGAAACTTGTCATACTTGACTTGCCCATGAGTTCCATTATGTTGGACAATAATGTGATCATGAAATTTAAGTCTTTGACTGAAATGAAGTTAAGTGGTTGCCTATCACTAAAACAAGTACCTGACATGACTGGTGTACCAAATTTGAAGAAACTACGTCTTGATTTTTGCAAGAATTTAGTTACAGTTCATGATTCCGTTGGATTCCTTGAGAAACTTGTAGATTTGAATCTTACCAATTGTCGCAGTCTCAGGAATCTTCCTCGTGGAATCAACTTAACTTCTCTTAGAACCATGTCTCTTGGATATTGTGTAAGTCTCAAGAATTTTCCGGAAATTTTAGGGAAGATGGAAAACATAAACTACCTATGTTTGAGTGGTACCGCTATAAGAGAATTGCCCTTTTCAATTGGAAATCTTGTTGGCCTCACAATGCTGTCTGTGGATGATTGCAAAAGGCTACTTGAACTACCAAGTAGTATTTTTGTGTTGCCAAAACTAAACACCTTTTTGGCCACCTCTTGTAAGATGCTTGCAAAAATAAAGAGCCAAGGACAAGAGCAAGAAACTGTGTCTTCAAATGTGAAGAAGATCACTCTTTGTTCGGTTGGAAGAGATCGCAATTGCTGTTTGATAGATGAATTTGTTGCTGCACTTCTTCCTTGCTTGCAGCTTGTGACATCTTTATTCCTTAACCATAGCAATATCACAATACTTCCAGCTTGCATCAATGCTTGTCGCTCTTTGACCAAACTTTATTTGGATGAATGCAGGGAGCTTAGAGAAATTAGGGGGCTGCCCCCACATATAAAATATCTTTCAGCAGTGAATTGCACATCATTGACTTCCCACTCTAAGGAAATGCTACTGACTCAGGCACTGTACAAGACAAGGGGCACATATTTTTTGTTTCCAGGATCTACTATCCAAAGTTTGTTGAATCACTGTAGCAGGAGAACATCCTTGTCCTTCTGGTTTCGTAACAAATTCCCTGCAATTACTCTCTGTGTTGTTGGAGTTTCGGGTGGTTTACTTCGCTATGAGTTTGACTTGATCATTAATAGTAGCCAACGGTTCCCGAATTTTCTCCATGTCAGGTCCACAAGTGTATTGGAGACAAATCATACAGTTCTGTTCGATCTACGACTTGAATTTGGCAAAGGTAAAATTGAAAAGTTATACATTGAGAATGGATGGAACCATGCTGAGATTTCGTTAGTGAATTGTGGAGGTAGAACAAATATGAAATGGATGGGAGTTCATGTGCATGAACAAAAAACAAGCATGGCAGATATTCGATTTACGCTTAGGGATCAATGTTTTAAGTTGCGAAAAATCGTGGACAAAATTAAAAGAATCAACACTTTCATTGAAAATGAAGAGCTTAGGAAAGGAGAAGAAACGACAGCAGCTTCAATGAAGGCAATCAAGGATTGGCATAATTATATTTTTGGAAATTATGCACCATCTCTTTGTTTGGAGCAACTTTACCTACAA	3426	0.3815	MHVSNIYFKYEALGWRFFIRDFCERFIYYSRIFIFATATMIKTTASSSYTEEWAYDVFLSFRGEDTHTGFTGNLYNALCAKGINTFIDDRELKKGEEITASLMRAIRESRIAIVIFSQNYAWSTFCLEELVKIMECLKHKGRLVWPVFYKVDPCDVRHQKGTYAEALVKHEGRIMNENEKEKVKRWRFALHNAANLSGWHFQHGYEYEYEFIGKIIEGVSKKINRIPLYVANYAVGLESRVQKVNSLLDVESSDGVHVIGIYGIGGIGKTTLACALYNLIADQFESLCFLADVRKNSMKHGLVQLQETLLSDLVGEKDIKLGNVNKGIPIVKRRLFQKKILLILDDVDKLDQIKALAGGLDWFGSGSKIVITTRDKHLLYVCGVERTYEVEGLNHKEAFELFSCNAFKRKQVKPTYLDVSKRAILYSDGLPLSLEIIGSDLYGKTKLEWKSALDSFEKIPHENILDILRVSYDGLKEFEKEIFLDIACFFKGYYLSDVINILCSGRGSTPEYGIQVLIDKCLIKIDQHRVRMHDLIEDMGREIVRLESPSKPGERSRLWFAKDILHVFKENKGSDKIEIIMLHLLKDKEVQWDGSALMKMENLKILIVENARFSRGPNDLPKSLRVLKWREYPEPLLPSNFDPKKLVILDLPMSSIMLDNNVIMKFKSLTEMKLSGCLSLKQVPDMTGVPNLKKLRLDFCKNLVTVHDSVGFLEKLVDLNLTNCRSLRNLPRGINLTSLRTMSLGYCVSLKNFPEILGKMENINYLCLSGTAIRELPFSIGNLVGLTMLSVDDCKRLLELPSSIFVLPKLNTFLATSCKMLAKIKSQGQEQETVSSNVKKITLCSVGRDRNCCLIDEFVAALLPCLQLVTSLFLNHSNITILPACINACRSLTKLYLDECRELREIRGLPPHIKYLSAVNCTSLTSHSKEMLLTQALYKTRGTYFLFPGSTIQSLLNHCSRRTSLSFWFRNKFPAITLCVVGVSGGLLRYEFDLIINSSQRFPNFLHVRSTSVLETNHTVLFDLRLEFGKGKIEKLYIENGWNHAEISLVNCGGRTNMKWMGVHVHEQKTSMADIRFTLRDQCFKLRKIVDKIKRINTFIENEELRKGEETTAASMKAIKDWHNYIFGNYAPSLCLEQLYLQ	1142

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr718g00005	1142	Pfam	NB-ARC domain	238	462	IPR002182	GO:0043531
	Mupr718g00005	1142	SUPERFAMILY	Toll/Interleukin receptor TIR domain	45	199	IPR035897	-
	Mupr718g00005	1142	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	55	817	IPR044974	GO:0006952
	Mupr718g00005	1142	SMART	till_3	54	196	IPR000157	GO:0007165
	Mupr718g00005	1142	Gene3D	Ribonuclease Inhibitor	588	725	IPR032675	-
	Mupr718g00005	1142	Pfam	TIR domain	54	224	IPR000157	GO:0007165
	Mupr718g00005	1142	FunFam	Disease resistance protein (TIR-NBS-LRR class)	51	225	-	-
	Mupr718g00005	1142	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	222	486	IPR027417	-
	Mupr718g00005	1142	Gene3D	-	224	386	IPR027417	-
	Mupr718g00005	1142	Gene3D	Ribonuclease Inhibitor	735	941	IPR032675	-
	Mupr718g00005	1142	PRINTS	Disease resistance protein signature	711	727	-	-
	Mupr718g00005	1142	PRINTS	Disease resistance protein signature	334	348	-	-
	Mupr718g00005	1142	PRINTS	Disease resistance protein signature	427	441	-	-
	Mupr718g00005	1142	PRINTS	Disease resistance protein signature	258	273	-	-
	Mupr718g00005	1142	Gene3D	-	52	223	IPR035897	-
	Mupr718g00005	1142	SUPERFAMILY	L domain-like	579	933	-	-
	Mupr718g00005	1142	ProSiteProfiles	TIR domain profile.	53	223	IPR000157	GO:0007165
	Mupr718g00005	1142	SUPERFAMILY	"Winged helix" DNA-binding domain	463	568	IPR036390	-
	Mupr718g00005	1142	Gene3D	-	392	476	IPR042197	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr718g00005	Mupr-Chr718	8924	15917	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr718g00005	644	876	WRKY Transcription Factor Family	AT4G12020	29.839	9.38e-15	77.8

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr718g00005	-		-	gmx:100814790	1323.53