Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7174g00007 ATGGTCCGTTCCCTGCGCAACAGATGGGCCTGGCCCAAACCTGACCCGGCAACCCAATGTTTTAAATTGAGTTCCGAAGGCGATGCTGAGTCGTTAGGCACACATTCTCCGTCGCCCCAGCCACATCACCAAGCAATGGCTCCGAAGAGAGGTGTAAAAGCTCCGGTTGTAGCAGCAAAGAAGAAGCCCGAGAAGGTGACGAACCCGTTGTTCGAGAAGCGTCCGAAGCAATTCGGGATCGGAGGTGCGTTGCCTCCGAAGCGGGACCTGACCAGGTTCGTGAAATGGCCCAAGACCGTCCAAATCCAACGCAAGAAGAGGATCCTCAAGCAGAGGCTCAAGGTCCCACCCGCACTTAACCAGTTCACCAAAACCCTAGACAAAAATCTCGCAACGAACCTTTTCAAGATGTTGCTGAAGTACAGGCCCGAAGATAAGGCGGAGAAGAAGGAGCGTCTTGTCAAAAGGGCTCAGGCTGAGGCTGACGGGAAATCTGTTGAAGCGAAGAAGCCTATTGTTGTCAAATACGGTCTCAACCATGTTACCTACCTTATTGAGCAGAATAAGGCACAACTGGTTGTGATTGCTCATGATGTGGACCCAATCGAGCTGGTGGTCTGGCTTCCCGCATTGTGCAGGAAGATGGAAATTCCGTACTGCATTGTCAAGGGCAAAGCACGCTTGGGATCGATTGTCCACAAGAAAACTGCTTCAGTTTTGTGCTTGACAACTGTCAAGAATGAAGACAAACTAGAGTTCAGTAGAATCCTAGAAGCTATCAAGGCCAACTTCAATGACAAGTACGATGAATACAGAAAGAAGTGGGGTGGTGGGGTCATGGGTTCCAAATCCCAAGCCAAGACCAGGGCCAAGGAGAGGCTCCTTGCCAAGGAAGCAGCCCAAAGAATGACCTAG 915 0.5093 MVRSLRNRWAWPKPDPATQCFKLSSEGDAESLGTHSPSPQPHHQAMAPKRGVKAPVVAAKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATNLFKMLLKYRPEDKAEKKERLVKRAQAEADGKSVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKGKARLGSIVHKKTASVLCLTTVKNEDKLEFSRILEAIKANFNDKYDEYRKKWGGGVMGSKSQAKTRAKERLLAKEAAQRMT 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7174g00007 304 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 88 284 - -
Mupr7174g00007 304 SUPERFAMILY L30e-like 134 275 IPR029064 -
Mupr7174g00007 304 Coils Coil 147 167 - -
Mupr7174g00007 304 Gene3D - 96 279 IPR029064 -
Mupr7174g00007 304 FunFam 60S ribosomal protein L7a 96 279 - -
Mupr7174g00007 304 MobiDBLite consensus disorder prediction 16 52 - -
Mupr7174g00007 304 ProSitePatterns Ribosomal protein L7Ae signature. 212 229 IPR004037 GO:0042254|GO:1990904
Mupr7174g00007 304 PRINTS Ribosomal protein L7A/RS6 family signature 174 188 IPR018492 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A/RS6 family signature 193 206 IPR018492 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A/RS6 family signature 209 219 IPR018492 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A/RS6 family signature 219 233 IPR018492 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 75 92 IPR001921 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 112 131 IPR001921 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 92 109 IPR001921 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 136 149 IPR001921 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 263 283 IPR001921 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 170 190 IPR001921 -
Mupr7174g00007 304 PRINTS Ribosomal protein L7A family signature 231 255 IPR001921 -
Mupr7174g00007 304 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 164 251 IPR004038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7174g00007 Mupr-Chr7174 45787 48275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7174g00007 46 304 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 84.942 2.13e-167 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7174g00007 K02936 - gmx:100792324 473.011