Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7174g00004 ATGGCAACTGATAAAAATGGGTATATAAGGGTATTTGAGCAGAGCAGAAACAGTACTATTGGCAGCAGAGCAGAAAGCACGTTGCGTGCGTACGTAGCGGCAATAGCAGAGCATCAAGAAGCAGAGCACGCTCACATTCCCACCGCAAACCCTACTCCGGTTACTCCTTCTACTCTAATGGAAGAGCAAAGAAAGCAAGACAAGGCTGTGCAACTAATGTCCTTTGACACTGGAGGAACCAACAATGATGTCTCTCATTCAAGTGAGAGTCATTTAATTCCAAACCCAAAATTTGTTATTGCAGCTGCACCTGGAAGAAATGGGAACCACTGGACTTGCTTCCCCAAACCATCTCATCATAACTATGTTGAGTATCTTTCAGAATCCTCAACTTATCTGCCAAACACTTCAACTGAATACATGATGGGGAGCACTTATCTACCTGTTGCCAACATCAATGATGCTAATGGGGTCACTGGAACAGACAGAAACTTCTTTTACAATGATCCAGGCAAAGCCTGCGCCTTTAAACTTATTGCTCCTTCAAGTAATGACTTTGACTTTAGGAAGCATGTAGGGTTTTGGAGACCGGATGAAGGAGAGGAAGCAATTAAAGTTGAAACTGAAAGTAGTCAAAATTTTCTTTATGCTGAGAGTCATGCTTCATGGACAGCAGATTCTGGTGGAGAGAAGCATAATGGTTCACGACTTGATCCAATGGTAACGGTTGGTGCACCTGCTTTCCTTCCCAAACCAGGATGCAGCTCCTCAAAACAGAAAGCACGTGTCACTGACCGTCAACGCAGGCAACGTATCGCTGAAAACCTCAAAGCCTTGCACGAATTGCTTCCAAATCCAGCAGAGGGAAGTCAAGCATACGTACTGGACGATATAATTGACTATATCAAATATTTGCAGCTTCAAATAAAGGAACAAAGTGCAAGTAGATTGCAAGCGGAATCAACTGCTATACCACTAGTTTTTCATGAGGGTTACGGCCACTATATCAACCAACAGATGCTCAATGAACCCCTTGAGGAGATAATGGGGAAACTACTTGAAGAACATGCAGCAGCAGCTGGTCAGTTACTAGAGAGTAAGGGTCTTTTCTTGCTGCCTATGGCTTTGGTTGATGACTTGAGTGAAGCTATGCAAATGTTTGGGTGA 1167 0.4362 MATDKNGYIRVFEQSRNSTIGSRAESTLRAYVAAIAEHQEAEHAHIPTANPTPVTPSTLMEEQRKQDKAVQLMSFDTGGTNNDVSHSSESHLIPNPKFVIAAAPGRNGNHWTCFPKPSHHNYVEYLSESSTYLPNTSTEYMMGSTYLPVANINDANGVTGTDRNFFYNDPGKACAFKLIAPSSNDFDFRKHVGFWRPDEGEEAIKVETESSQNFLYAESHASWTADSGGEKHNGSRLDPMVTVGAPAFLPKPGCSSSKQKARVTDRQRRQRIAENLKALHELLPNPAEGSQAYVLDDIIDYIKYLQLQIKEQSASRLQAESTAIPLVFHEGYGHYINQQMLNEPLEEIMGKLLEEHAAAAGQLLESKGLFLLPMALVDDLSEAMQMFG 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7174g00004 388 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 256 305 IPR011598 GO:0046983
Mupr7174g00004 388 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 95 376 - -
Mupr7174g00004 388 SMART finulus 262 311 IPR011598 GO:0046983
Mupr7174g00004 388 Gene3D - 255 324 IPR036638 GO:0046983
Mupr7174g00004 388 Pfam Helix-loop-helix DNA-binding domain 258 306 IPR011598 GO:0046983
Mupr7174g00004 388 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 256 320 IPR036638 GO:0046983
Mupr7174g00004 388 CDD bHLH_AtbHLH_like 264 311 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7174g00004 Mupr-Chr7174 22907 25080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7174g00004 227 383 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30980 36.364 5.91e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr7174g00004 HLH 7.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7174g00004 - - gmx:100788949 467.618