Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7174g00003 ATGAAGAGCTTCTTCGTTGAGCCTTTCAGTGGACCATTAACAATTTCTATATGGCATAAAGTTAATACAAATATTGGCAGAATATTTCACGACACCAAGTTGACAATCAATAATTCGTATACTACTTTATATTCCACGAACAGAGAAGCCGAGAGAGTGACACTTTTGACCTCTTTCGATTTTGTCTACGCTATAAATATTCCACAAACTCCTCTCTCATTCTCAATTTACTACTTGAGTTCTCGAGTCGCTATGACCATCTCGCTGTGTATGTGCAGACTAAGACAACCCCTAATAAATGTTCCATGCAGTGGCAAAAAATTGAATTTGAGGCAAATTGAGAAAGAGAAAGTAGTGGTTGTAATGGGAGCCACAGGAACTGGAAAGTCAAGACTCTCCATTGACCTTGCCACGTGTTTCCCATCAGAAATCATAAACTCCGACAAAATCCAAGTCTATCAAGGACTGGACATAGTCACAAACAAAATCTCCAAGGAAGAACAACGTGGGGTGGCGCACCATTTACTAGGAACGATAAATCCAAACACGGATTTCACGGTCAACGACTTCTGCGACACGTCATCAGCTGCCATTGACTCCATCACGGGTAGCGAGAGGCTTCCAATAATAGTTGGAGGCTCCAACTCGCATCTGGAGGCCTTGATCGACGACGACGATTACAAGTTCCGATCGCGCTACGAGTTTTGCTGTCTCTGGGTTGACGTGGAAATGCCCCTTCTTCGGTCCTACGTGGCAGAACGCGTTGACCAAATGTTTCGGAACGGAATGGTGGAGGAGCTGAGACCCTTTTATAGTCCCAATGGAGACTACTCGAGAGGGATTAGAAGGGCCATTGGGGTTCCGGAATTTGACCAATATTTTCGAAGGGAAGACTTTGTTGACGAGGAAACGAGGCAGAGGTTGTTGGAAGAAGCGGTTAAGGAAATGAAACTGAACACGTATAAGCTGGCAATGAAGCAGTTGAGGAAGATTCGTAGGCTCAGGACCGTTAAGAGATGGGAGATTCATCGCTTGGATGCTACGCCTGTATTTCGAAGCCGTGGGGAAGAAGCAAATCACGCCTGGAAGAACCTCGTCGCAGACCCTAGCGCTATGATCGTTGCTCGCTTTCTCTATAACTCCAACCATAACGCCAACGTTATTTCTCACCTTAGAGTGCCACCTTCACCTTCACCTTCACAAACTGTTATGGCTGCGGCAACGTGCTAG 1230 0.4561 MKSFFVEPFSGPLTISIWHKVNTNIGRIFHDTKLTINNSYTTLYSTNREAERVTLLTSFDFVYAINIPQTPLSFSIYYLSSRVAMTISLCMCRLRQPLINVPCSGKKLNLRQIEKEKVVVVMGATGTGKSRLSIDLATCFPSEIINSDKIQVYQGLDIVTNKISKEEQRGVAHHLLGTINPNTDFTVNDFCDTSSAAIDSITGSERLPIIVGGSNSHLEALIDDDDYKFRSRYEFCCLWVDVEMPLLRSYVAERVDQMFRNGMVEELRPFYSPNGDYSRGIRRAIGVPEFDQYFRREDFVDEETRQRLLEEAVKEMKLNTYKLAMKQLRKIRRLRTVKRWEIHRLDATPVFRSRGEEANHAWKNLVADPSAMIVARFLYNSNHNANVISHLRVPPSPSPSQTVMAAATC 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7174g00003 409 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 244 342 - -
Mupr7174g00003 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 226 IPR027417 -
Mupr7174g00003 409 Gene3D - 115 378 IPR027417 -
Mupr7174g00003 409 Pfam IPP transferase 229 332 - -
Mupr7174g00003 409 Pfam IPP transferase 151 224 - -
Mupr7174g00003 409 FunFam Adenylate isopentenyltransferase 5, chloroplastic 244 342 - -
Mupr7174g00003 409 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 115 377 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7174g00003 Mupr-Chr7174 15622 16962 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7174g00003 231 378 C2H2 Transcription Factor Family AT2G27760 33.714 1.31e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7174g00003 K10760 - gmx:100803964 520.776