Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7173g00005 ATGGCTTCATCTTCCTCCAACGGCAGTTCCAGCGAAAGCAAGACGAGGGACATCGACGTCCACCTCGCCGGCTTGGGCTACAAAGTCCGCTCCTCGGAGATGCATCAAGTGGCTCAAACTATCGAGCGTTTAGAGAACGTGATTGTGAACTCATCCTCCGACATATATCAACTCGCTTCCGACACGGTCCACTACAATCCCTCCGACATAGGTTCCTGGCTCGACACCCTCCTCTCCGAGTTCGACGAAACGGCGCCGTTGTCCTACGATCTGCCCGACCTACCCGATCTGGCCGCGGATCAAAATCACCAACTGGCACTCGTAACCACCGTGGAAGAAGACTCGGCGATAAGACTGGTCCACATGCTGATGACGTGTGCGGATTCCGTGCAACGTGGCGACATCCCATTCGCTGGCTCCCTCATCGAGAACATGCAGGGGCTGTTGGCGCACGTGAACACCAACTGCGGCATAGGGAAAGTCGCCGGCTACTTCATCGACGCCCTGCGCCGCCGCATCTTTGCACAGAACTTCCTAACGTCCCCGTACGAGAACGACGTTCTCTACCACCACTACTACGAGGCGTGCCCGTACTTAAAGTTCGCGCACTTCACCGCCAATCAGGCGATCTTGGAGGCCTTCAACGGCCACGACTGCGTCCACGTCATCGACTTCAACCTCATGCAAGGTCTCCAGTGGCCCGCGCTGATTCAGGCCCTCGCGCTTCGGCCTGGCGGGCCACCCCTGCTGCGGTTGACCGGTATTGGGCCTCCCTCGCCCGACGACCGCGACACGCTCCGTGAAATCGGTCTAAGGCTCGCCGAGCTGGCACGCTCGGTTAACGTACGGTTCGCTTTCCGCGGCGTGGCGGCATGGCGGCTGGAGGACGTGAAGCTGTGGATGCTGCAGGTGAGTCCGAAGGAGGCAGTGGCGGTTAACTCTGTCATGCAGCTGCACCGGCTCCTCGGGGCGGGTTCCGGCGTTGACGCGGTGCTGGGTTGGATCCGGAGCTTGAACCCGAAGATCGTCACGGTTGTGGAGCAGGAAGCGAACCACAATGGGGAGGGGTTTTTGGAGCGGTTCACAGAGGCGCTACACTACTACTCGACTGTTTTCGATTCGCTGGAAGCATGTCCGGTCGAACCGGACAAGGCCTTGGCGGAGATGTACCTGCAGAGGGAGATATGCAACGTGGTGTGCTGCGAGGGAACGGCTCGAGTCGAGAGGCACGAGCCGCTAGCTAAGTGGAGGGAACGGCTCGGGAAAGCCGGCTTCAGACCGTTGCAATTGGGTTCGAACGCCTTCAAGCAAGCCAGCATGTTGTTGACTCTGTTCTCAGCCGAGGGGTACTCCGTGGAAGAGAATCAAGGTTGCTTGACTCTGGGTTGGCATAACCGACCCCTAATTGCGGCTTCGGCTTGGCAAGCCGCGCCGATGCAAGACAGGGAAACGCTGCGTTTCGAGCAATGA 1470 0.5925 MASSSSNGSSSESKTRDIDVHLAGLGYKVRSSEMHQVAQTIERLENVIVNSSSDIYQLASDTVHYNPSDIGSWLDTLLSEFDETAPLSYDLPDLPDLAADQNHQLALVTTVEEDSAIRLVHMLMTCADSVQRGDIPFAGSLIENMQGLLAHVNTNCGIGKVAGYFIDALRRRIFAQNFLTSPYENDVLYHHYYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMQGLQWPALIQALALRPGGPPLLRLTGIGPPSPDDRDTLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKLWMLQVSPKEAVAVNSVMQLHRLLGAGSGVDAVLGWIRSLNPKIVTVVEQEANHNGEGFLERFTEALHYYSTVFDSLEACPVEPDKALAEMYLQREICNVVCCEGTARVERHEPLAKWRERLGKAGFRPLQLGSNAFKQASMLLTLFSAEGYSVEENQGCLTLGWHNRPLIAASAWQAAPMQDRETLRFEQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7173g00005 489 Pfam GRAS domain family 119 475 IPR005202 -
Mupr7173g00005 489 Pfam Transcriptional regulator DELLA protein N terminal 19 84 IPR021914 -
Mupr7173g00005 489 Gene3D - 17 81 IPR038088 -
Mupr7173g00005 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 99 471 IPR005202 -
Mupr7173g00005 489 ProSiteProfiles GRAS family profile. 110 475 IPR005202 -
Mupr7173g00005 489 SMART DELLA_2 19 91 - -
Mupr7173g00005 489 FunFam DELLA protein GAI 17 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7173g00005 Mupr-Chr7173 15857 17326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7173g00005 10 475 GRAS Transcription Factor Family AT1G14920 49.513 6.08e-168 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mupr7173g00005 GRAS 7.4e-126 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7173g00005 K14494 - gmx:100805968 786.178