Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7161g00003 ATGGGTAGACGTCCCTGCCGTCCCAAAGAGATAAACAAAGGTGCTTGGTCTCGAGAAGAAGACGAAACCCTCTCCAAATATGTTGCCATCCATGGAGAAGGCAAATGGCAGAAGGTTGCCCAAAATGCAGGTTTAAAGCGATGTGGAAAAAGTTGCAGACAAAGATGGTTGAATTATCTCAAGCCCGGTATAAAAAGAGGCGACATCTCTGTCGATGAAGAGGATATGATTATGAGACTTCATCGTCTTCTTGGTAACAGATGGGCATTGATAGCAAAGAGACTACCTGGACGAACAGACAATGAAATTAAGAATTACTGGAACACGAATCTTTCAAGGAAATTACAGAAACAGCCTTCACCATCGTCTATTTCTTCACTTCAACAAAAGTATCATGAAGAAGAAAAGACCAAACAAGTGCATGTAGCACCCGAAGCTCCAAGGCCATGGAGAGTTAATGGAGTTCAATGCAGTAAAATTTTGGAGAATGGTGAATGTGGTAATAGGCGTAGTAGTACTACTCCCAGTCTCTCAAACAAAGTAGAGGGTAGTAGTGATGAAGCTTCGTTTAGTGATTTTCTCGTAGATATTGATGAAAACCAATTGTTGATTGGTGATGATTCCAACTTAAAGCCCCCAGAAACGGAAGAAGACAACAACACTAACAAGGAAGGGTTAACCAACAGTCCTAGCTCATCATCACCTTCTGATCATTGTCACCATCTCTTACCAGAGAAATTTGAGCCTGTGGAGACCCTTTTGGATGTGGAGCTTAAGAGGATGGCTTCCTTTCTTGGACTTGAAAATGATTGA 813 0.4182 MGRRPCRPKEINKGAWSREEDETLSKYVAIHGEGKWQKVAQNAGLKRCGKSCRQRWLNYLKPGIKRGDISVDEEDMIMRLHRLLGNRWALIAKRLPGRTDNEIKNYWNTNLSRKLQKQPSPSSISSLQQKYHEEEKTKQVHVAPEAPRPWRVNGVQCSKILENGECGNRRSSTTPSLSNKVEGSSDEASFSDFLVDIDENQLLIGDDSNLKPPETEEDNNTNKEGLTNSPSSSSPSDHCHHLLPEKFEPVETLLDVELKRMASFLGLEND 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7161g00003 270 CDD SANT 70 111 IPR001005 -
Mupr7161g00003 270 MobiDBLite consensus disorder prediction 114 128 - -
Mupr7161g00003 270 MobiDBLite consensus disorder prediction 222 238 - -
Mupr7161g00003 270 MobiDBLite consensus disorder prediction 204 241 - -
Mupr7161g00003 270 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Mupr7161g00003 270 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Mupr7161g00003 270 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 210 - -
Mupr7161g00003 270 CDD SANT 15 60 IPR001005 -
Mupr7161g00003 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Mupr7161g00003 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 115 IPR017930 -
Mupr7161g00003 270 SMART sant 65 113 IPR001005 -
Mupr7161g00003 270 SMART sant 12 62 IPR001005 -
Mupr7161g00003 270 FunFam MYB-related transcription factor 12 65 - -
Mupr7161g00003 270 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Mupr7161g00003 270 Gene3D - 6 66 - -
Mupr7161g00003 270 MobiDBLite consensus disorder prediction 165 185 - -
Mupr7161g00003 270 MobiDBLite consensus disorder prediction 114 147 - -
Mupr7161g00003 270 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Mupr7161g00003 270 Gene3D - 69 142 - -
Mupr7161g00003 270 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7161g00003 Mupr-Chr7161 20556 21936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7161g00003 1 115 MYB Transcription Factor Family AT2G16720 63.793 8.15e-51 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr7161g00003 Myb_DNA-binding 7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7161g00003 K09422 - gmx:547568 419.468