Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7145g00001 ATGCTCATGCTTTCCAATTCATCACCATCTCTCTTACCACCCCTCCACTTTCACAACCATGTATTTAGTTTGTTATATGATGGTCTAACCGAAGCAGGTCAAACAAATACAACTTCAGTGGAATGTCTTGTCAACAGCATTTCTCGATTCATACATCTAGTTTCTTGCCAAACAGTGAAACCTATGCCCCTTGAGAAGAACTGTAATAATATGGTTAGTGTGTTGAAGCGATTGAAACCAGTACTCGATGATATTGTGGATTACAAAATCCCTTTGGATGAAAATCTGTATGTAGAATGTGAAGAATTGGATATGAGGGTTGATGAAGCTAGGGAGTTCATTGAAATATGGGACCCGAAGATGAGCAAGATTCATAGTCTTCTTCAAAGTGGGAAATTGTTGATCAACTTACAGGACTCTTCACTTAAGATTTGTCACATGATAGTTAGATCCCTAAAGTCACCTGCATCTGTTTCAGTTTTGGCTAATCTTCAGGAACTTCAGTGTCTTAAGAAAGAACCTGCAATGGTCTATATAGAAGAAGCACTGAGAAATCAAAGGGGTAATATTGAACCTTGCTATGATCATCTAAAAGAAATTATAGGGTTACTCAAATTTACATCAAACCAGGAGCTCCTGAAAGAAAGTATTGCTGTGGAAAAGGAAAGGTTAAATGCTGAAGTCAATAAAACAAAAGGGGACTTGGATGAAATTAACCAAATTGTGAATCTTGTGTGCAATTTGCGTGATTATGTGATGAAAATTGAGCGCCCTGAAGTCAAAAGTGGTGTCTCAATTCCCACATACTTTCGATGTTCTTTATCACTGGAACTCATGTCGGATCCTGTTATTGTGGCTTCAGGTCAGACATATGAAAGGAATTCCATTCAAAAGTGGCTTGATCATGGGCTAACTGTTTGTCCCAACACTCATCAGAGACTTGTCCATACAAATCTCATTCCCAATTATACTGTTAAAGCTATGATAGCAAATTGGTGTGAGGAAAATAATGTGAAATTTCCCAGTAACTCTATGCACAGTAATTCTGCTCGAATTTCATCCCCCTCAGATAATATATTACATCAGGATTTAGATCATGTATGTATCTTTGAGTCTTCAGATAGTAGTAATTCCAATTCAAATGCAACTGGAAATACATTTGAGAAGCAAAAGAATGATAACTCTTTCAGATCAAGCAGGGAATCCAATAGATGCCAGAATGGAGAGACAGAAAAGTTTGAGCAACAACAATCCCCTGCACCTTCATGTAGTAACAGCAGAAGTGAATCATTTTCAAGTTCTATTTCTAGTACCGATTATTTACTTCCAGTTTCAAAGGAGGTGTCTGGTATATCTAATAATAATCAAAATGAGTTGTCTGGAGAAATTACTAATGGGTGTCCTGCTTCTCCTGCATACAAAGAATCAGGGATTTATCCTTGGTTATCTGGAAAGCAACATCATAGCCCTGGTTCAAAAATTGGAAGGATGGAGAATGAAAATGAGTATAATGGAAATAGTAATAAGATTATTAGTCATTCAAAAGTTGATTCTCATCCTGTTTCCAGCTTAGGATCTGATGAATTGATCACCACATCTCATGTCAATGAGTTGATTGAAGACCTACAGAGTCTATCAAATGAAACACAAACTGCTGCTGCAGAAGAGTTGAGGCTTCGCACCAAGCATAACATGGAGAACCGTATCATTGTTGGGCAGTGTGGGGCTATTATGCCTTTACTTTCACTGCTATATTCAGACATGAAGATAACACAAGAGCATGCTGTGACAGCTCTACTGAATTTGTCAATTTATGAAGGCAATAAGGCATTGGTTATGGAAGCAGGGGCCACAGAACCACTTATCCATGTTTTGAAGACAGGAAATGATGGTGCCAAGGAGAATTCTGCTGCTGCTCTGTTCAGCCTCTCTGTAATAGATAACAATAAGGCAAAAATTGGCCGTTCTGGGGCAGTTAAAGCTTTGGTGGATCTTCTAGCCTCAGGAACTCTTAGGGGAAAGAAGGATGCTGCTACTGCTTTATTCAACCTTTCAATATTCCACGAGAATAAAGCTCGTATAGTTCAAGCTGGAGCTGTGAAGTTCCTGGTTCTGCTTTTGGACCCTGCTAATGGAATGGTTGACAAGGCTGTTGCTCTTTTGGCAAACCTGTCAACAATTGCAGAGGGCCGATTAGAAATTGCAAGGGAAGGGGGCATTCCCTTACTTGTTGAAATTGTTGAATCAGATTCTCAGAGGGGAAAGGAAAATGCTGCTTCCATCCTCTTGCAACTATGTCTTCATAGTCGAAAGTTTTGTACCCTGGTTCTCCAAGAAGGAGCTGTACCTCCCCTAGTTGCATTATCTCAGTCTGGTACTCCAAGAGCAAAGGAAAAGGCTTGGTTCTTTTCTAGTAGAGGTCCGTTTTTAAGAGAA 2436 0.3929 MLMLSNSSPSLLPPLHFHNHVFSLLYDGLTEAGQTNTTSVECLVNSISRFIHLVSCQTVKPMPLEKNCNNMVSVLKRLKPVLDDIVDYKIPLDENLYVECEELDMRVDEAREFIEIWDPKMSKIHSLLQSGKLLINLQDSSLKICHMIVRSLKSPASVSVLANLQELQCLKKEPAMVYIEEALRNQRGNIEPCYDHLKEIIGLLKFTSNQELLKESIAVEKERLNAEVNKTKGDLDEINQIVNLVCNLRDYVMKIERPEVKSGVSIPTYFRCSLSLELMSDPVIVASGQTYERNSIQKWLDHGLTVCPNTHQRLVHTNLIPNYTVKAMIANWCEENNVKFPSNSMHSNSARISSPSDNILHQDLDHVCIFESSDSSNSNSNATGNTFEKQKNDNSFRSSRESNRCQNGETEKFEQQQSPAPSCSNSRSESFSSSISSTDYLLPVSKEVSGISNNNQNELSGEITNGCPASPAYKESGIYPWLSGKQHHSPGSKIGRMENENEYNGNSNKIISHSKVDSHPVSSLGSDELITTSHVNELIEDLQSLSNETQTAAAEELRLRTKHNMENRIIVGQCGAIMPLLSLLYSDMKITQEHAVTALLNLSIYEGNKALVMEAGATEPLIHVLKTGNDGAKENSAAALFSLSVIDNNKAKIGRSGAVKALVDLLASGTLRGKKDAATALFNLSIFHENKARIVQAGAVKFLVLLLDPANGMVDKAVALLANLSTIAEGRLEIAREGGIPLLVEIVESDSQRGKENAASILLQLCLHSRKFCTLVLQEGAVPPLVALSQSGTPRAKEKAWFFSSRGPFLRE 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7145g00001 812 MobiDBLite consensus disorder prediction 393 408 - -
Mupr7145g00001 812 FunFam RING-type E3 ubiquitin transferase 266 338 - -
Mupr7145g00001 812 PANTHER U BOX DOMAIN-CONTAINING 63 800 - -
Mupr7145g00001 812 SMART Ubox_2 269 332 IPR003613 GO:0004842|GO:0016567
Mupr7145g00001 812 MobiDBLite consensus disorder prediction 374 392 - -
Mupr7145g00001 812 Pfam Armadillo/beta-catenin-like repeat 607 644 IPR000225 GO:0005515
Mupr7145g00001 812 Pfam Armadillo/beta-catenin-like repeat 648 685 IPR000225 GO:0005515
Mupr7145g00001 812 Pfam Armadillo/beta-catenin-like repeat 566 603 IPR000225 GO:0005515
Mupr7145g00001 812 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 265 340 IPR013083 -
Mupr7145g00001 812 Pfam U-box domain 266 337 IPR003613 GO:0004842|GO:0016567
Mupr7145g00001 812 SUPERFAMILY ARM repeat 528 801 IPR016024 -
Mupr7145g00001 812 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 575 617 IPR000225 GO:0005515
Mupr7145g00001 812 FunFam RING-type E3 ubiquitin transferase 519 806 - -
Mupr7145g00001 812 CDD RING-Ubox_PUB 267 319 IPR045210 -
Mupr7145g00001 812 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 657 699 IPR000225 GO:0005515
Mupr7145g00001 812 MobiDBLite consensus disorder prediction 409 430 - -
Mupr7145g00001 812 MobiDBLite consensus disorder prediction 374 430 - -
Mupr7145g00001 812 SUPERFAMILY RING/U-box 264 340 - -
Mupr7145g00001 812 Gene3D - 515 802 IPR011989 -
Mupr7145g00001 812 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 698 739 IPR000225 GO:0005515
Mupr7145g00001 812 SMART arm_5 605 645 IPR000225 GO:0005515
Mupr7145g00001 812 SMART arm_5 727 767 IPR000225 GO:0005515
Mupr7145g00001 812 SMART arm_5 646 686 IPR000225 GO:0005515
Mupr7145g00001 812 SMART arm_5 564 604 IPR000225 GO:0005515
Mupr7145g00001 812 SMART arm_5 687 726 IPR000225 GO:0005515
Mupr7145g00001 812 Coils Coil 535 555 - -
Mupr7145g00001 812 Coils Coil 221 241 - -
Mupr7145g00001 812 ProSiteProfiles U-box domain profile. 265 339 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7145g00001 Mupr-Chr7145 16553 21404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7145g00001 40 800 U-box Gene Family AT3G54790 52.393 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7145g00001 - - gmx:100804684 1258.43