Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7144g00001 ATGGAAGGGAGAAAGATTAAAAGAAAACAAAAGCGAGAGATTAAGAAGATTGAGAATACAAGAAATCTTCTCATTACATTCACAAAGAGAAAATATTGCATTCACAAAAAAGCCAATGAGTTATCAACACTTTGTGGGGCAAAAGTTGATATACTCATGTGTACTTCGTCTGCAGATTGGTTTAGTTATGGAGAACCTTCTCATCGGGCGATGACAAGGTGTAGTGGTGAAAGAAAAACTACCAAAGATGGTATTAATCAGCTTGTGCAGTATCACACCAAATCAAAGATCGATGAACTGAATGAAAAAAATAATGCACTTATGAATCAAATGTCCTATGAAAAAGAACAAGAGAATGAACTTGTGAAGATTTTGAAGATAAGAAATACTTGCGGCTGGTGGGATGCCAAAATACAAGATCTTAGTTATGAACAAGCTAAGGAAATGGAGGCATCTTTTGTGGAACTCAAAAAGAAATTAGAAAATGAACTTTCAATCAAGCATGGAGAGAAAGAGAATGTTATTCTCGTGAGTAGAGTCAACTCTTGTCATACTTATACGAGTGGGAGTAACATATCTGAAGTTGTCTTTGGTGCTAAGAATGAAGATTGTGGAATTGGTGCAAGTGAAAGTATTTTGCCTAATATTTCTCGTAGTCCCTCAAATGAAGAGCAAAAATTCAATTTTCTTCCATATGGTGAACGTAGGGAAGATCTATTTGATATTGTTTATCCTCTAAGAATTCAAGCCCGTGGAGATAGTTATTTTGTTGATGATCCAAATGCTAGTAGTGGCAAATCTGCTTTTACTTCTCCTACAAAGCAAACACAAGGACTTAACCTTACTAATGCAAGTGGAAGTAGCAATCATATCCTTGGATTCTCCTCTTCAAGTCAATCCCAAAAATATCATCCATTTCTATCCATTGCAAATAATCAGACTATTGGTAGAAAAGGTAATTATGACTTTGTCTTCTCTCCTTCAAATCAATATCAAGATACTAACCAATTTTTGTGCGATGCAAGTAATAAGAATGCTGGTGGAAATGATAGTGATGTTCTTTTTGCCTCCTCCCATCTAAATCAACAGCAAGGGGCTAATCCATTTATATACATTGAAAATAAGGAGAATGGTGATTTTTCTTTTCCTCCATTCAATGGTTATGGTCATGGCTACTTCTGA 1182 0.3528 MEGRKIKRKQKREIKKIENTRNLLITFTKRKYCIHKKANELSTLCGAKVDILMCTSSADWFSYGEPSHRAMTRCSGERKTTKDGINQLVQYHTKSKIDELNEKNNALMNQMSYEKEQENELVKILKIRNTCGWWDAKIQDLSYEQAKEMEASFVELKKKLENELSIKHGEKENVILVSRVNSCHTYTSGSNISEVVFGAKNEDCGIGASESILPNISRSPSNEEQKFNFLPYGERREDLFDIVYPLRIQARGDSYFVDDPNASSGKSAFTSPTKQTQGLNLTNASGSSNHILGFSSSSQSQKYHPFLSIANNQTIGRKGNYDFVFSPSNQYQDTNQFLCDASNKNAGGNDSDVLFASSHLNQQQGANPFIYIENKENGDFSFPPFNGYGHGYF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7144g00001 393 Coils Coil 97 117 - -
Mupr7144g00001 393 Coils Coil 143 163 - -
Mupr7144g00001 393 CDD MADS 8 57 - -
Mupr7144g00001 393 SUPERFAMILY SRF-like 9 72 IPR036879 GO:0003677|GO:0046983
Mupr7144g00001 393 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 16 60 IPR002100 GO:0003677|GO:0046983
Mupr7144g00001 393 PRINTS MADS domain signature 44 65 IPR002100 GO:0003677|GO:0046983
Mupr7144g00001 393 PRINTS MADS domain signature 9 29 IPR002100 GO:0003677|GO:0046983
Mupr7144g00001 393 PRINTS MADS domain signature 29 44 IPR002100 GO:0003677|GO:0046983
Mupr7144g00001 393 Gene3D - 19 110 IPR036879 GO:0003677|GO:0046983
Mupr7144g00001 393 SMART madsneu2 7 66 IPR002100 GO:0003677|GO:0046983
Mupr7144g00001 393 PANTHER MADS BOX PROTEIN 9 162 - -
Mupr7144g00001 393 ProSiteProfiles MADS-box domain profile. 7 67 IPR002100 GO:0003677|GO:0046983
Mupr7144g00001 393 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7144g00001 Mupr-Chr7144 5692 6996 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7144g00001 4 165 Type I MADS-box Gene Family AT5G60440 31.928 9.97e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mupr7144g00001 SRF-TF 5.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7144g00001 - K12412 ccaj:109813207 396.741