Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr712g00009 ATGGCTCCGAGGGATAATAACAGATCCAACGTTGTTGCCGGACCCAACTCGACCCACCTCGCCAAAGAGATCCGTTACAGGGGCGTCAGAAAGCGACCGTGGGGCCGTTACGCCGCCGAGATCCGCGACCCGGGCAAGAAAACCCGCGTCTGGCTCGGCACCTTCGACACCGCCGAGGAGGCCGCGCGTGCCTACGACGCGGCGGCGCGTGAGTTCCGCGGCGCGAAAGCCAAGACCAATTTCCCCACACACGCGGAGCTCACCCACGGCGCCGCGCGTAGCCCCAGCCAGAGCAGCACCCTCGAGTCCTCTTCTCCGCCGCCGCTGGACCTCACTCTCGCCCCACTCGCCGCCGCCAGCGCGTTGGTGTTCCCCGTTGCCCGCCCCGTGCTGTTCTTCGACGCGTTCGCGCGGACCGAGATGGGTGCCTTCGATCTGCCCGCGGTCGGGTTCCGCCGAGGCGCCGTCGACGGCGCCGGCACTCAGAGCGACTCCGACTCGTCCTCGGTCGTGGACTACGAGCGGGTCCCACATCGGAGAGTGTTGGATCTTGACCTTAACGTTCCTCCTCCGCCCGAGGTTGCCTGA 588 0.6752 MAPRDNNRSNVVAGPNSTHLAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDAAAREFRGAKAKTNFPTHAELTHGAARSPSQSSTLESSSPPPLDLTLAPLAAASALVFPVARPVLFFDAFARTEMGAFDLPAVGFRRGAVDGAGTQSDSDSSSVVDYERVPHRRVLDLDLNVPPPPEVA 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr712g00009 195 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Mupr712g00009 195 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Mupr712g00009 195 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Mupr712g00009 195 MobiDBLite consensus disorder prediction 87 107 - -
Mupr712g00009 195 MobiDBLite consensus disorder prediction 90 107 - -
Mupr712g00009 195 Gene3D AP2/ERF domain 24 84 IPR036955 GO:0003700|GO:0006355
Mupr712g00009 195 Pfam AP2 domain 25 74 IPR001471 GO:0003700|GO:0006355
Mupr712g00009 195 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 142 - -
Mupr712g00009 195 FunFam Ethylene-responsive transcription factor 2 25 83 - -
Mupr712g00009 195 CDD AP2 25 84 IPR001471 GO:0003700|GO:0006355
Mupr712g00009 195 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Mupr712g00009 195 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr712g00009 Mupr-Chr712 42948 43535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr712g00009 16 149 AP2-EREBP Transcription Factor Family AT3G15210 60.390 8.80e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr712g00009 AP2 1.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr712g00009 K09286 - gmx:100785455 224.942