Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7127g00007 ATGAGCTATCACATGCGGAATAATGAAGATACACACAGAGGTTTGAAAAGAAAGCCTGCACAGATGGATCGAGGGCAAGAGTGGGGATCTTACAATAAGAATTCTAGACCTTATGATAGGAACATGGTTCCTGATGGTTGGTTAGACTGTCCAGCGCATGGGCAAGAACTAGGATGCATAATCCCTTCAAAGGTTCCACTTGGCGAATCCTTCAATGATAACATTCCAAGTAAAAAATATACTCCCAAGCAAGCAATTCTTCAACAAAGAGTCTTAGGTAGAGAACTTGGTTTAGTGATTGATTTGACAAACACTACTCGTTACTATCCTGTATCAGATTGGACAAAAGAAGGGATTGGTCATGTCAAGATAAGATGCAAAGGAAGAGATGCTGTACCTGATGATGAATCTGTAAAAAACTTTTGTGATGAGGTTCTGGATTTTTGCTCCAAAAGAACAAACGCGAAGAAATATATACTTGTACATTGCACACATGGGCATAATCGTACAGGTTATATGATTGTTCACTTTCTTGTGCGTACGGAATCTATTTCTGTTACTGAGGCAATAAATAAATTTGCTTTGGCACGTCACCCAGGAATTTACAAGCAGGATTACATTGACGCCCTGTACATGTTTTATCATGAAAAGAAGCCTGGAGATCTTGTTTGTCCTCAAACTCCTGAATGGAAGAGACTTCCTGATCCTGATTTCTGGGGCACAGCTGTCCCAGCTGTGGACAATCATGGACACATTCCTGTACAGGAGAATATTGTGGGGAATGAAGTATTGACGAATGATGATGTTTTGGGAGATCCAATTCCTCCAAATCAGCTGCGTGCAATGCAAGAAGCTTGTTATCAACTGCTCAAGTTGGGCACAGGGGGAAGAGGACGTTCGCAGTTCCCTGGATCTCACCCTGTTTCTCTGAACAGGGACAATCTGCAACTCTTAAGACAACGATATTACTATGCCACTTGGAAAGCTGATGGAACACGATATATGATGCTGATTACATGTGACGGATGTTATCTGATTGACAGAAAATTTCTTTTCCGGAAGATCAGTATGCGGTTTCCTTGCAGATATTCAAATGGGGGTACACCTGAGAGGAACCACCACTTCACATTACTTGATGGGGAGATGATTATTGACACGGATCCACATACACATAAGCAAGAGAGAAGATACCTCATTTATGATTTGATTGCAATCAACCAAGTCTCTTTGACAGAGCTGCCATTCTATGAAAGGTGGAAGTTACTGGAGAAAGAAGTAATTGAACCTCGTAACATGGAACGGGAGGGCCTTTCCAAGAGTGTAAATCCTTATTATAGATATGACTTGGAACCATTTAGTGTAAGGAGGAAGGGTTTTTGGTTACTATCTACTGTGTCAAAGCTCCTTCATAAATTCATTCCACAACTCTCGCATTCATCAGATGGTCTTGTATTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACATGAAGGTCTTCTGAAGTGGAAATACCCTGAGATGAACTCTGTTGATTTCCTCTGTGAGGTCGGATCTGGTGATCGTCCCCTGCTTTTTCTGTTTGAACGTGGAAAGAAGAAGTTAATGGAAGAGAATGTTATTTTTAAAGATGCATCAGACATTTCTTCCTATTCCGGGAAGATCATTGAGTGCTACTGGGATTCTGTGGAGCATCATTGGGTCTGTATGCGGACCAGAATAGACAAAGCAACTCCAAATGAAATCAATACCTATAGAAAGGTAATGCGAAGCATAAAGGATAACATCACAGAAGAAGTCTTATTGAATGAGATCAACGAGATCATTTGCCTGCCGTTGTATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAGCATATGGTCTCTTCGCGGCGCAAATCACAAGATCATATTGGAAAAAGCTCAACGCAAACGGCTTTGATAGGATACAGTAATTAA 1962 0.4134 MSYHMRNNEDTHRGLKRKPAQMDRGQEWGSYNKNSRPYDRNMVPDGWLDCPAHGQELGCIIPSKVPLGESFNDNIPSKKYTPKQAILQQRVLGRELGLVIDLTNTTRYYPVSDWTKEGIGHVKIRCKGRDAVPDDESVKNFCDEVLDFCSKRTNAKKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINKFALARHPGIYKQDYIDALYMFYHEKKPGDLVCPQTPEWKRLPDPDFWGTAVPAVDNHGHIPVQENIVGNEVLTNDDVLGDPIPPNQLRAMQEACYQLLKLGTGGRGRSQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITCDGCYLIDRKFLFRKISMRFPCRYSNGGTPERNHHFTLLDGEMIIDTDPHTHKQERRYLIYDLIAINQVSLTELPFYERWKLLEKEVIEPRNMEREGLSKSVNPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHSSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLCEVGSGDRPLLFLFERGKKKLMEENVIFKDASDISSYSGKIIECYWDSVEHHWVCMRTRIDKATPNEINTYRKVMRSIKDNITEEVLLNEINEIICLPLYADRIQRDIKAHQHMVSSRRKSQDHIGKSSTQTALIGYSN 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7127g00007 653 CDD RNA_5'-triphosphatase 46 212 - -
Mupr7127g00007 653 PIRSF mRNA_capping_HCE 30 638 IPR017074 GO:0004484|GO:0006370|GO:0140818
Mupr7127g00007 653 ProSitePatterns Tyrosine specific protein phosphatases active site. 161 171 IPR016130 GO:0016311|GO:0016791
Mupr7127g00007 653 SMART dsp_5 76 216 IPR020422 GO:0006470|GO:0008138
Mupr7127g00007 653 CDD Adenylation_mRNA_capping 277 505 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mupr7127g00007 653 FunFam mRNA capping enzyme, putative 265 502 - -
Mupr7127g00007 653 Pfam mRNA capping enzyme, catalytic domain 306 504 IPR001339 GO:0004484|GO:0005524|GO:0006370
Mupr7127g00007 653 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 231 IPR029021 -
Mupr7127g00007 653 Pfam mRNA capping enzyme, C-terminal domain 539 602 IPR013846 -
Mupr7127g00007 653 MobiDBLite consensus disorder prediction 1 23 - -
Mupr7127g00007 653 Gene3D - 503 610 IPR012340 -
Mupr7127g00007 653 FunFam mRNA capping enzyme family protein 39 251 - -
Mupr7127g00007 653 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 282 505 - -
Mupr7127g00007 653 Gene3D DNA ligase/mRNA capping enzyme 257 502 - -
Mupr7127g00007 653 Pfam Dual specificity phosphatase, catalytic domain 95 214 IPR000340 GO:0008138|GO:0016311
Mupr7127g00007 653 MobiDBLite consensus disorder prediction 627 653 - -
Mupr7127g00007 653 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 139 208 IPR000387 GO:0016311|GO:0016791
Mupr7127g00007 653 PANTHER MRNA-CAPPING ENZYME 38 615 - -
Mupr7127g00007 653 SUPERFAMILY Nucleic acid-binding proteins 507 619 IPR012340 -
Mupr7127g00007 653 Gene3D Protein tyrosine phosphatase superfamily 17 237 IPR029021 -
Mupr7127g00007 653 FunFam mRNA-capping enzyme isoform A 539 611 - -
Mupr7127g00007 653 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7127g00007 Mupr-Chr7127 23930 34035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7127g00007 32 624 Protein tyrosine phosphatase (PTP) family AT3G09100 63.621 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7127g00007 K13917 - vra:106758011 1210.67