Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7117g00001 ATGGAAGGCTCTGAATCCGATTCTGCAGCACTTTCCATTCCCAATGGCGAAGAGCCGCAATTGGGGGCACCTTCTTCCCCCGGCGCTCATCCTCAACCGTCAGATCTCAATCACGCGGCCGAAGAGGAAGAGGCACTTGCTGGGGAGCTTCAGAGTAAGTTGGACTTCATGGGTGCGGACCAAAGTGAGGAGAAAGTTTTGAACTTGAACGATGCTGGCGAAGAAACTGGTAAGGGTGATGAATATAGTAGGAGTTGGGAGTCTAATTGTTGGAATGAGGAAGTGGGTGTGGATGTTGATGTTGATGTTGATGTTGATGGTGATCAAGTGGAGATTAAGGAAGAGAAAAATAGTGGTGTAACTCACCACTACCCTTTGAGGCCTGAAGCTGAGGATTGTGCATTTTATATGAAAACTGGGTCTTGCAAGTTTGGGTTTAATTGCAAGTTTAATCACCCCATTAGGAGGAAAACCCAGGGTTTTAAAGAGAAGGCAGGAGAAAGAGAAGAACCCACAGAGAGATCGGGCACGGCAGAATGCAAGTATTATCAAAGGTCTGGGGGTTGTAAGTTTGGAAAATCATGTAAATATAACCACACAAGAGGAAAAATTTCAACAGCACCAGTTTTAGAACTAAACTTTCTTGGCCTGCCTATTCGTCTGGGAGAGAGAGAGTGCCCCTATTACATGCGCACAGGCTCATGTAAGTTTGGAGCAAACTGCAAGTTCAACCATCCTGACCCTACAGCTGTTGGAGGATGCGACCCTCCTTCTGGGTATGGTAATGGAGGGTCTATTTCATTACAAGGTGTATCACAACCATCTGTACCCTCCTGGTCTTCTCCAAGAACATTAAATGACGCATCTCCTTTTGTGCCAATGATGCTTTCACCTAGTCAAGGAGTTTCTACCCAAAGTTCTGATTGGAATGGATATCAGGCATCTGTCTACCTACCTGAGAGGAGCATGCATCCACCTTCTACATTTGTCATGAACAACCCAGCAATCGATACAAATGTTTACATGCACCCTCAAAAGCAGATGCCTGTTGAAGAGTTTCCAGAAAGGCCTGGCGAACCTGAATGCACCTACTTCTTAAAAACTGGGGATTGCAAGTTTAAAACTAATTGTAAATTTCACCATCCAAAGAATCGGATTGCAAGATTACCCCCATGCGACCTCAGTGACAAGGGTCTGCCTTTGAGACCTGACCAAAGTGTCTGCACACATTACAGTCGCTATGGAATTTGCAAATTTGGACCAGCTTGTAAGTTCGACCACCCAATAAACTTGCAGCCCTTACTGATGCCTGGACTTGGTCAACAATCCTACTCAAACTCAGCTAGTGTTGAGGTGGCTGGGATAGGTGGAAGTGCAGGTGCAACTGATGCAACCATTCAGCAATCTGTTTTTTGA 1416 0.4555 MEGSESDSAALSIPNGEEPQLGAPSSPGAHPQPSDLNHAAEEEEALAGELQSKLDFMGADQSEEKVLNLNDAGEETGKGDEYSRSWESNCWNEEVGVDVDVDVDVDGDQVEIKEEKNSGVTHHYPLRPEAEDCAFYMKTGSCKFGFNCKFNHPIRRKTQGFKEKAGEREEPTERSGTAECKYYQRSGGCKFGKSCKYNHTRGKISTAPVLELNFLGLPIRLGERECPYYMRTGSCKFGANCKFNHPDPTAVGGCDPPSGYGNGGSISLQGVSQPSVPSWSSPRTLNDASPFVPMMLSPSQGVSTQSSDWNGYQASVYLPERSMHPPSTFVMNNPAIDTNVYMHPQKQMPVEEFPERPGEPECTYFLKTGDCKFKTNCKFHHPKNRIARLPPCDLSDKGLPLRPDQSVCTHYSRYGICKFGPACKFDHPINLQPLLMPGLGQQSYSNSASVEVAGIGGSAGATDATIQQSVF 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7117g00001 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 176 199 IPR000571 GO:0046872
Mupr7117g00001 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 358 383 IPR000571 GO:0046872
Mupr7117g00001 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 131 153 IPR000571 GO:0046872
Mupr7117g00001 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 404 428 IPR000571 GO:0046872
Mupr7117g00001 471 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 222 246 IPR000571 GO:0046872
Mupr7117g00001 471 Gene3D - 81 164 - -
Mupr7117g00001 471 PANTHER PROTEIN PHOSPHATASE RELATED 33 450 - -
Mupr7117g00001 471 MobiDBLite consensus disorder prediction 67 82 - -
Mupr7117g00001 471 ProSiteProfiles Zinc finger C3H1-type profile. 402 430 IPR000571 GO:0046872
Mupr7117g00001 471 Gene3D - 169 253 - -
Mupr7117g00001 471 Gene3D - 334 397 - -
Mupr7117g00001 471 Gene3D - 401 448 - -
Mupr7117g00001 471 ProSiteProfiles Zinc finger C3H1-type profile. 127 155 IPR000571 GO:0046872
Mupr7117g00001 471 SUPERFAMILY CCCH zinc finger 361 385 IPR036855 GO:0046872
Mupr7117g00001 471 SUPERFAMILY CCCH zinc finger 400 428 IPR036855 GO:0046872
Mupr7117g00001 471 MobiDBLite consensus disorder prediction 1 85 - -
Mupr7117g00001 471 SUPERFAMILY CCCH zinc finger 176 204 IPR036855 GO:0046872
Mupr7117g00001 471 ProSiteProfiles Zinc finger C3H1-type profile. 220 248 IPR000571 GO:0046872
Mupr7117g00001 471 SMART c3hfinal6 402 429 IPR000571 GO:0046872
Mupr7117g00001 471 SMART c3hfinal6 127 154 IPR000571 GO:0046872
Mupr7117g00001 471 SMART c3hfinal6 220 247 IPR000571 GO:0046872
Mupr7117g00001 471 SMART c3hfinal6 174 201 IPR000571 GO:0046872
Mupr7117g00001 471 SMART c3hfinal6 356 383 IPR000571 GO:0046872
Mupr7117g00001 471 SUPERFAMILY CCCH zinc finger 221 247 IPR036855 GO:0046872
Mupr7117g00001 471 SUPERFAMILY CCCH zinc finger 126 155 IPR036855 GO:0046872
Mupr7117g00001 471 ProSiteProfiles Zinc finger C3H1-type profile. 174 202 IPR000571 GO:0046872
Mupr7117g00001 471 ProSiteProfiles Zinc finger C3H1-type profile. 356 384 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7117g00001 Mupr-Chr7117 3135 7463 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7117g00001 348 453 C2H2 Transcription Factor Family AT3G02830 33.987 3.13e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr7117g00001 zf-CCCH 1.1e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7117g00001 - - gmx:100786894 798.89