Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7114g00005 ATGGTGGCGTTGCCCATCAGCAGGTTGAAGAGGGAGCAATGCAATCGCACTAAACACGATTCTACCTTCTCCCATTGGAAGATTCTCATTGGACCTTCTGATTGGGAAGACCATTCCCAAGGAAAGGAAGGATGTGCAAGGTACAGGATTCATAACCTCCCACAACAATCGGGTCCAGGGGTGTACGAGCTTGGAATTGCTGTGTCCGGTGCTGGTTTGGGGCGTCAAATTTACAAGCTTGTCCCTCACACTCACCGCATTGTGGTGGTTTACCTTGGACAAGCAGACAACGTGAGAACGCGACTCCAGTGTTATGGCAGAACTGGGGCTCATTTGGACAATACCTCTTCTGATTATCCTTCTCTCCAAAAGGGTCGTCCCTTGTTTCAGGAGATCTTTTCACTAGGATTCTCAATCGTTTATAGATGGGCTCCTATGCAAAACAAGGAAGATGCCCTGCGAACAGAGGCTCAGCTGCTTAGTACATTCGATTATGCATGGAACACAAGCAACAATGGTATCCGTAGGCCTGATGATATTCTTCAAAAGCTACACAAAATTGCTTCGGGCACGAGAACAATTTCAGATGTGGCCAGAGCACTTCTACCTTTCACTCAGAAGCAAGTGGGTATCCGAATTAAATCAAGTGAGCTACCTCTGGCAGATGACAAATCAGATGAAGCAGACAATGGCAGCTATAATTTCCTATCTCGAGTATTCAGCTTTAACAGATCACGTCCTAGGATAGTTCAGGATATCACCGGTGTCATTCAGGAAGAGGAAAATGCTAAAATTTGTGGAGTGGCATTGGGTGATGGTTCAATTTGTAGAAGGCCACCAGTTGAAAAAAGAATGAGGTGTCCTGAACACAAAGGAATGAGAACAAATGTGTCCACTGCCAGAGCAATCAGGGCTCCCAAGTCAGAGAGTCATGATGTAGAAGACACTCCACAAACAGTGGTTGGGAGTCCTGTTGATGAAAGTTTCACAAACACCAATATATGTGGAATCATCTTGAAAGATGGCTCCACCTGTAGAAGACAACCAGTTAAAGGAAGAAAAAGGTGCCATGAGCACAAAGGGTGGAGAATTCGTGCATCTATTCAAATAAAGGGCAATGGATACAGATACCAAAATGTCAGCCATGATGTAGAAGACCCTCTACAAACGATGGTTGAGAGTCCAGTTGATGAGAGTATCACAAACACCAATATATGTGGAATCATCTTAAATGATGGCTCAACCTGTAGGAGACAACCAGTTAAAGGAAGAAAAAGATGCCATGAGCACAAAGGGAGGAGAATTCAAAGCATGGAGCTCAAACTCCACCCATCAATGGCTTCCGTTGGATCCATTCCACGCGCAGGAAACTCCATTTCCTCCATTCCTTTCTGCACCTACGCGGTTCTCGATGCCAGCAGGCGCCGAAACGGCACCACCAGCAGTCGTTCCACTCACAAAACCCCTCCTTTGCGGAAGGGGAACCAACCCAATGCACCGAAATTGAACCTCGACCATCAAAACCAAAAAGCCCCATTACCCTTGAATATGGACTTGGTGGCCTTGTGCGAAGAGGGTAACCTCGATCAAGCATTGGAACTCATGGGTCAAGGTGCCGTTGCTGATTACCGCGTTTATCTCGCGCTCTTGAATTTGTGTGAGCACACAAGGTCGCTCGAATCGGGGAAAAGGGTCCATGATTTCCTGAGAAGATCGAACTTTCGTGGGGACGTTGAATTAAGCAACAGATTGATTGGAATGTACGGCAAATGTGGCAGTGTGAAGGATGCACGCCGAGTGTTTGATCAAATGCCGGAGAGAAACATCGCTTCGTGGCATTTGATGATTGGTGAGTACACGGCGAATGGTTTAGGGTATGATGGTTTATTGGTTTTTCAGCAGATGAAGCAAGCAGGGGTGCCACCTGATGGGGAGACTTTTGAATTGGTTTTGGCTGCATGTGCACGGGAAGTAGCAGTGGAGGAAGGGTTCTTGCACTTTGAGTCCATGAAGGAGTATGGAGTTGTTCCCAGTATGGAGCATTACTTGGAGGTTGTTAACATTCTGGGGAATGCTGGTCACTTGAATGAAGCTGAGGAGTTCATTGGGAAGATACCAATTGAGCTTGGAGTTGAGGCTTGGGAGTCTCTTCGATATTTTGCACGAATTCATGGAGATTTAGATCTTGAAGATCGTGCAGAGGAGTTGTTAAGGTATCTCGATCCTTCAGAAGTCGCTGCTGATAAACTTCCCACACCTCCAAGAAAGAAGCAGTCTGATATTAACATGCTAGAGGAGAAGAATAGGGTGACCGAGTATCGGTTTCCTGCTCCCTATAAAGAAGAGGCTCATGAGAAATTGGGAGGTTTGAGTGGGCAGATGAGGGAAGCAGGTTATGTGCCGGATACAAGATATGTCCTCCATGACATTGATGAAGAGGAAAAGGAGAAGGCCTTGCAATATCATAGCGAACGTTTGGCAATTGCTTATGGCCTCATCAGTACTCCCCCAAGGACTACACTTAGAATCATCAAAAACCTACGTATATGTGGGGACTGCCACAATGCAATCAAAATTATGTCAAAGATTGTTGGAAGGGAGCTTATTGTTAGGGATAACAAGAGATTCCATCATTTCAAAGATGGAAAATGCTCCTGTGGAGATTATTGGTAG 2673 0.4583 MVALPISRLKREQCNRTKHDSTFSHWKILIGPSDWEDHSQGKEGCARYRIHNLPQQSGPGVYELGIAVSGAGLGRQIYKLVPHTHRIVVVYLGQADNVRTRLQCYGRTGAHLDNTSSDYPSLQKGRPLFQEIFSLGFSIVYRWAPMQNKEDALRTEAQLLSTFDYAWNTSNNGIRRPDDILQKLHKIASGTRTISDVARALLPFTQKQVGIRIKSSELPLADDKSDEADNGSYNFLSRVFSFNRSRPRIVQDITGVIQEEENAKICGVALGDGSICRRPPVEKRMRCPEHKGMRTNVSTARAIRAPKSESHDVEDTPQTVVGSPVDESFTNTNICGIILKDGSTCRRQPVKGRKRCHEHKGWRIRASIQIKGNGYRYQNVSHDVEDPLQTMVESPVDESITNTNICGIILNDGSTCRRQPVKGRKRCHEHKGRRIQSMELKLHPSMASVGSIPRAGNSISSIPFCTYAVLDASRRRNGTTSSRSTHKTPPLRKGNQPNAPKLNLDHQNQKAPLPLNMDLVALCEEGNLDQALELMGQGAVADYRVYLALLNLCEHTRSLESGKRVHDFLRRSNFRGDVELSNRLIGMYGKCGSVKDARRVFDQMPERNIASWHLMIGEYTANGLGYDGLLVFQQMKQAGVPPDGETFELVLAACAREVAVEEGFLHFESMKEYGVVPSMEHYLEVVNILGNAGHLNEAEEFIGKIPIELGVEAWESLRYFARIHGDLDLEDRAEELLRYLDPSEVAADKLPTPPRKKQSDINMLEEKNRVTEYRFPAPYKEEAHEKLGGLSGQMREAGYVPDTRYVLHDIDEEEKEKALQYHSERLAIAYGLISTPPRTTLRIIKNLRICGDCHNAIKIMSKIVGRELIVRDNKRFHHFKDGKCSCGDYW 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7114g00005 890 FunFam Pentatricopeptide repeat-containing protein mitochondrial 560 671 - -
Mupr7114g00005 890 Gene3D Tetratricopeptide repeat domain 513 664 IPR011990 GO:0005515
Mupr7114g00005 890 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 643 677 IPR002885 -
Mupr7114g00005 890 Pfam DYW family of nucleic acid deaminases 798 890 IPR032867 GO:0008270
Mupr7114g00005 890 NCBIfam pentatricopeptide repeat 582 609 IPR002885 -
Mupr7114g00005 890 Pfam GIY-YIG domain-containing protein 23 181 - -
Mupr7114g00005 890 PANTHER PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED 391 484 IPR038909 GO:0003677|GO:0006355
Mupr7114g00005 890 MobiDBLite consensus disorder prediction 306 325 - -
Mupr7114g00005 890 Pfam PPR repeat 582 609 IPR002885 -
Mupr7114g00005 890 Pfam PPR repeat 611 640 IPR002885 -
Mupr7114g00005 890 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 577 611 IPR002885 -
Mupr7114g00005 890 MobiDBLite consensus disorder prediction 475 503 - -
Mupr7114g00005 890 MobiDBLite consensus disorder prediction 475 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7114g00005 Mupr-Chr7114 30441 36325 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7114g00005 282 443 HRT Transcription Factor Family AT5G56780 32.927 5.15e-16 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HRT Mupr7114g00005 DYW_deaminase 3.2e-35 CL0109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7114g00005 - - gmx:100802330 783.097