Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr710g00003 GTGAGGTGTGTGAAGAAGGGAGGGATAAGGTTCACGGTGAATGGGAATCCACACTTCAATTTGGTGCTGATATCAAACGTGGGAGGGGCAGGGAACGTGAAAGCAGCATCAGTGAAAGGTTCAGCAACTGGGTGGCTTCCAATGAGCAGAAATTGGGGCCAGAATTGGCAGAGCAACACATACCTCGTCGGTCAGACCCTTTCTTTCATCGTCACAACCAGCGATGGTCGATCAGTGACATGTAACAATGTGGTTCCTGCTGGTTGGAAATTTGGACATTCCTTCCAAGCTAGTACTCAATTT 303 0.4851 VRCVKKGGIRFTVNGNPHFNLVLISNVGGAGNVKAASVKGSATGWLPMSRNWGQNWQSNTYLVGQTLSFIVTTSDGRSVTCNNVVPAGWKFGHSFQASTQF 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr710g00003 101 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 18 97 IPR007117 -
Mupr710g00003 101 Gene3D - 6 101 IPR036749 -
Mupr710g00003 101 PRINTS Expansin/Lol pI family signature 83 97 IPR007118 GO:0005576
Mupr710g00003 101 PRINTS Expansin/Lol pI family signature 45 59 IPR007118 GO:0005576
Mupr710g00003 101 FunFam Expansin 8 101 - -
Mupr710g00003 101 SUPERFAMILY PHL pollen allergen 5 96 IPR036749 -
Mupr710g00003 101 Pfam Expansin C-terminal domain 9 86 IPR007117 -
Mupr710g00003 101 PANTHER EXPANSIN-A15 1 100 IPR002963 GO:0009664
Mupr710g00003 101 PRINTS Expansin signature 7 19 IPR002963 GO:0009664
Mupr710g00003 101 PRINTS Expansin signature 54 75 IPR002963 GO:0009664
Mupr710g00003 101 PRINTS Expansin signature 83 99 IPR002963 GO:0009664
Mupr710g00003 101 PRINTS Expansin signature 19 40 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr710g00003 Mupr-Chr710 39456 39758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr710g00003 1 96 Expansin Gene Family AT5G05290 67.010 1.09e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr710g00003 - K20628 gmx:100797425 166.777