Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7108g00001 ATGGATGTTAAGGTGAAGAAAGCACGGTCCATAGAAGAGGTGCAGCAGAGTGAAGACATTAAAAAAGGTCCATGGAGCGTTGAAGAGGACACCATTCTCGTAAATTACGTCGCCACCCACGGCGACGGCCTGAAGAGATCGGGGAAGAGTTGCAGGCTAAGATGGCTAAACTACTTGCGTCCGGATGTTCGTCGCGGAAATATAACACTCCAAGAACAGATAACCATTCTCGACCTCCACTCTCGCTGGGGCAATAGGTGGTCGAAAATTGCTCGGCAACTTCCGGGGAGAACAGACAACGAAATCAAGAATTATTGGAGGACCCGAGTGATTAAGCAAGCAAGGAATCTCAACTGTGACGTGGACAGTAAACAGTTCAAAGATGCCTTGCGTTACGTGTGGATGCCCCGTCTCATGGAGAGGATTCAGCCACCACCAACGGAAAGTTTAGACCCCTCCCAATCTCATCCAAACTTATCTGCTCCAGCCCTCCAACACGGTTCGGCTTCCACTGCCTTGGATTCATCAGCCTCTGAGTTACAGCCTCGTTTAGATTCTGAACATTTGGGTTATAATGTTTCGGGTGTATGCCAAAGTTTCAATGATCAAATTTTTGAACAGGGGAATAGCACGTTCCCCTTGGGTGATGGGGACTTGATGGAGACTTTGTGGGACGATGAGCATATATGGCTTATGCGACAACTTTGTGATGATCTCGAAATTAAAGACAATTTCCTTGAGTGA 744 0.4745 MDVKVKKARSIEEVQQSEDIKKGPWSVEEDTILVNYVATHGDGLKRSGKSCRLRWLNYLRPDVRRGNITLQEQITILDLHSRWGNRWSKIARQLPGRTDNEIKNYWRTRVIKQARNLNCDVDSKQFKDALRYVWMPRLMERIQPPPTESLDPSQSHPNLSAPALQHGSASTALDSSASELQPRLDSEHLGYNVSGVCQSFNDQIFEQGNSTFPLGDGDLMETLWDDEHIWLMRQLCDDLEIKDNFLE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7108g00001 247 Gene3D - 19 65 - -
Mupr7108g00001 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 114 IPR017930 -
Mupr7108g00001 247 Gene3D - 69 110 - -
Mupr7108g00001 247 Pfam Myb-like DNA-binding domain 22 59 IPR001005 -
Mupr7108g00001 247 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Mupr7108g00001 247 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 170 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mupr7108g00001 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 59 IPR017930 -
Mupr7108g00001 247 SUPERFAMILY Homeodomain-like 19 106 IPR009057 -
Mupr7108g00001 247 FunFam MYB transcription factor 69 132 - -
Mupr7108g00001 247 CDD SANT 69 108 IPR001005 -
Mupr7108g00001 247 MobiDBLite consensus disorder prediction 147 179 - -
Mupr7108g00001 247 ProSiteProfiles Myb-like domain profile. 17 110 IPR001005 -
Mupr7108g00001 247 SMART sant 64 112 IPR001005 -
Mupr7108g00001 247 SMART sant 21 61 IPR001005 -
Mupr7108g00001 247 MobiDBLite consensus disorder prediction 143 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7108g00001 Mupr-Chr7108 1409 2384 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7108g00001 15 238 MYB Transcription Factor Family AT2G47190 50.588 1.05e-68 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr7108g00001 Myb_DNA-binding 2.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7108g00001 K09422 - gmx:100797220 356.681