Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7100g00001 ATGGACAGTAGTATTCTGGGTCTTCTCAAACTTCGAGTTAAGAGAGGTCATAATCTTGCAATTCGCGATGCAATTAAAAGAGGTGCCAGCGACCCTTATGTCGTTGTCAACATGGGCGAACAGAAGCTGAGGACTCATGTTGTAAAAAACAACTGCAATCCTGTGTGGAATGACGATTTGACCCTTTCTATAAAGGACGTTAAAACCCCAATACATCTGTCTGTTTATGACAAAGATACTTTCTCTGGGGATGACAGAATGGGTGAGGCAGATATAGACTTAAAGCCATATGCTCAGTGTGTGCAGGTGGGGTTCAACAATCTCTCAAATGGTTCTTCAGTCATGAAGGTTCAACCAGATAAAACTAATTGCCTTGCTAAAGAGAGCCACTGCATTTGGAAAAATGGAAATCTTGTCCAAGAAATGATTTTGAGATTGAGAAATGTTGAGAGTGGAGAATTAGTTGTGGAAATTGAGTGGATGGATGTTATTGGTTGCAAGGGTTTATCACATGTAGAAATTTAA 525 0.4 MDSSILGLLKLRVKRGHNLAIRDAIKRGASDPYVVVNMGEQKLRTHVVKNNCNPVWNDDLTLSIKDVKTPIHLSVYDKDTFSGDDRMGEADIDLKPYAQCVQVGFNNLSNGSSVMKVQPDKTNCLAKESHCIWKNGNLVQEMILRLRNVESGELVVEIEWMDVIGCKGLSHVEI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7100g00001 174 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 166 IPR044562 -
Mupr7100g00001 174 Gene3D C2 domain 5 166 IPR035892 -
Mupr7100g00001 174 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 95 IPR035892 -
Mupr7100g00001 174 PRINTS C2 domain signature 26 38 IPR000008 -
Mupr7100g00001 174 PRINTS C2 domain signature 50 63 IPR000008 -
Mupr7100g00001 174 PRINTS C2 domain signature 71 79 IPR000008 -
Mupr7100g00001 174 ProSiteProfiles C2 domain profile. 1 107 IPR000008 -
Mupr7100g00001 174 SMART C2_3c 8 106 IPR000008 -
Mupr7100g00001 174 Pfam C2 domain 8 96 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7100g00001 Mupr-Chr7100 11179 13043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7100g00001 42 171 C2H2 Transcription Factor Family AT1G70790 56.061 2.73e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7100g00001 - - gmx:100784381 291.197