Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7092g00002 ATGGGCACGGTGATGAATGAGGAGAAGGAGAAGGAGAATGAGCACCATGCCAAGACACTCATCTGTGCCCTCAACCTTCTCTCGCGCGACCTCCCTCTCCCCTCTCACATCCTCAACTCCGTCTCCTCCATCTACCGCAACCACGACGATGGAGGGAATTCTGGAGAGGATTTAATAACGGATCTTGAAGATGCGCTGTCGAAGCAGCGTCCGAATTGTGTGTCAGGTTTGAAATTGGAGGAAGCAAGGGCAAATCGATATCGGAGTCAGATTCAACATCGGTTAAATGAGCTTCAAGAATTGCCTTCAAGCAGGGGAGAGGACCTGCAGACAAAGTGCTTGCTTGAACTTTATGGACTAAAGCTAGCAGAGTTACAGTTGAAGGTTCGGTCTGATGTGAGTTCTGAATACTGGCTCAATACTAAGTGTGCATATCCTGATAGGCAATTGTTTGATTGGGGCATGATGAGGTTGCGGCGTCCATTGTATGGTGTTGGAGATCCATTTTCCATGGATGCCGATGATCAATTAAGGAAAAAACGGGAGGCTGAGAGACTGTCAAGATTAGAAGAAAAGGAGAAAAATCATATAGAGACTAGAACGAGAAAATTTTTTGCAGAAATACTCAATACTGTCCGTGAGTTCCAATTACAAATTCAAGCTTCTTTGAAGAGGAGAAAACAGAGGAATGATGGTATCCAGGCATGGCATGGAAGGCAAAGACAACGGGCAACCCGAGCAGAGAAATTGAGATTCCAAGCCTTGAAGGCTGATGATCAAGAAGCTTACATGAGAATGGTGAAAGAGAGTAAGAATGAAAGATTAACTTTACTTCTTGAAGAAACAAATAAACTACTAGTAAACTTAGGAGCCGCTGTTCAACGTCAAAAGGACTCCAAATATTCAGATGGTATTGAACCCTTGGAAGATTCTGAAGCTGATTTACCTGAGTCAGATGCTTCAAAGAATGGAGTTTCTAAGGAATCACCACTTGATGAAGATTTAGATATGATAGATTCTGATCATAATGGTGATTCCAGTGATTTACTTGAAGGTCAGCGGCAATACAACTCTGCCATACATTCAATTCAAGAAAAGGTAACTGAGCAACCCTCTACACTTCAAGGTGGAGAATTAAGACCATACCAGATAGAGGGGCTCCAATGGATGCTTTCTCTATTTAATAACAACTTAAATGGAATTTTGGCTGATGAAATGGGGCTTGGAAAGACAATACAAACAATTTCGCTGATAGCATATCTTATGGAACACAAGGGTGTGACTGGTCCCCACTTGATTGTTGCTCCAAAGGCTGTTCTGCCAAATTGGATCAATGAATTCACAACATGGGCTCCTAGCATCAAAACAATTCTTTATGATGGACGGTTAGAAGAGAGGAAAGCAATGAAGGAAGAACTGTCAGGGGAGGGGAAATTTAGTGTTCTAATAACGCACTATGATCTTATAATGAGAGATAAAGCATTTCTCAAGAAAATTCAATGGTACTACTTGATCGTAGATGAAGGGCATCGGTTGAAGAATCATGAATCTGCTCTAGCTAGAACCTTGGACAATGGCTATCGCATTCAACGAAGACTTCTGTTGACTGGTACCCCAATTCAGAACAGTTTGCAGGAGTTGTGGTCTTTGCTTAATTTTCTTCTTCCAAACATTTTTAACTCAGTTCAGAATTTCGAGGACTGGTTTAATGCCCCCTTTGCAGACCGAGTTGATGTCTCTCTCACAGATGAGGAACAACTATTGATCATCCGGCGTCTGCATCAAGTAATAAGGCCCTTCATATTACGAAGGAAAAAGGATGAGGTGGAAAAATATCTTCCTGGGAAATCTCAGGTCATACTCAAATGTGACATGTCAGCCTGGCAGAAAGTATATTATCAACAAGTTACTGATGTAGGCAGAGTTGGCTTAGACAATGGTTCTGGAAAATCAAAAAGTCTACAAAACTTAACAATGCAACTCAGGAAGTGTTGTAACCATCCCTACCTCTTCGTGGGAGAATATGATATGTATAAACGTAAGGAGGAGATTGTCAGAGCATCGGGTAAGTTTGAACTTCTTGACCGTTTGCTCCCAAAACTTCGCAGATCTGGTCATAGAGTCCTCCTTTTCTCACAAATGACTCGACTTATGGACACTCTCGAAATCTATTTGCGACTTCATGATTTTAAGTATCTTAGACTTGATGGGTCAACAAAAACCGAGGAAAGAGGCAATCTTCTACGGAAATTTAATGCTCCCGACTCCCCATACTTTATGTTTCTTTTGAGCACCCGTGCTGGAGGTCTTGGTTTGAACTTACAAACAGCAGATACTGTTATAATATTTGATAGCGATTGGAACCCGCAAATGGATCAACAAGCTGAGGACCGGGCACATCGCATTGGACAAAAAAAGGAAGTCAGGGTTTTTGTGTTGGTTAGTGTAGGATCAATTGAAGAGGTGATTTTAGAGCGTGCAAAACAAAAGATGGGCATCGATGCCAAAGTCATCCAGGCTGGACTTTTCAACACAACTTCAACAGCCCAGGACAGGAGAGAAATGTTAGAAGAGATTATGCGTAGAGGTACAAGCTCACTTGGGACAGATGTGCCTAGTGAGAGAGAAATTAACCGCCTTGCTGCTCGATCAGATGAGGAATTTTGGCTGTTTGAAAAAATGGACGAAGAGAGAAGACAAAAGGAAAATTACAGATCTCGTCTCATGGAAGAGCATGAATTACCAGATTGGGTGTATTCTCCAATTAACAAGGATGATAAGGCCAAAGATTCCAACAGTGGTGTCACTGGAAAGCGGAAAAGAAAAGAAGTGGTATATGCAGATTCATTAAGTGATCTGCAATGGATGAAGGCTGTGGAGAATGGGGAAGACATATCAAAGTTTTCAGCTAAAGGAAAAAGAAGAGACCACCTCTCATCTGACAGCATTGCACAAGCCGGTGATAATACAGGAGCAGAAGAAAGTTTTGAGTTTAGGACTGAAAGTGTTCCCATGGCAAATGAACGAACAAGTGAAGATAGTGTCCATGTGACCCCTTCCTCAAAGAGATTCAAGCCTGAAGGAACAAATTTTCTAAAACATACATACGAGGATGTTGGAAGTGGTCTGAACCGCCATGTGTTATCATGGAATACTCACAAAAAGAAGAGATCAAGCTATCTTGGCCAGGGTTCATTATCTGATACTAGAGGGCAGTCTTCAAATGGAAGAGCAAACTGGAACTGA 3246 0.4193 MGTVMNEEKEKENEHHAKTLICALNLLSRDLPLPSHILNSVSSIYRNHDDGGNSGEDLITDLEDALSKQRPNCVSGLKLEEARANRYRSQIQHRLNELQELPSSRGEDLQTKCLLELYGLKLAELQLKVRSDVSSEYWLNTKCAYPDRQLFDWGMMRLRRPLYGVGDPFSMDADDQLRKKREAERLSRLEEKEKNHIETRTRKFFAEILNTVREFQLQIQASLKRRKQRNDGIQAWHGRQRQRATRAEKLRFQALKADDQEAYMRMVKESKNERLTLLLEETNKLLVNLGAAVQRQKDSKYSDGIEPLEDSEADLPESDASKNGVSKESPLDEDLDMIDSDHNGDSSDLLEGQRQYNSAIHSIQEKVTEQPSTLQGGELRPYQIEGLQWMLSLFNNNLNGILADEMGLGKTIQTISLIAYLMEHKGVTGPHLIVAPKAVLPNWINEFTTWAPSIKTILYDGRLEERKAMKEELSGEGKFSVLITHYDLIMRDKAFLKKIQWYYLIVDEGHRLKNHESALARTLDNGYRIQRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQLLIIRRLHQVIRPFILRRKKDEVEKYLPGKSQVILKCDMSAWQKVYYQQVTDVGRVGLDNGSGKSKSLQNLTMQLRKCCNHPYLFVGEYDMYKRKEEIVRASGKFELLDRLLPKLRRSGHRVLLFSQMTRLMDTLEIYLRLHDFKYLRLDGSTKTEERGNLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRRGTSSLGTDVPSEREINRLAARSDEEFWLFEKMDEERRQKENYRSRLMEEHELPDWVYSPINKDDKAKDSNSGVTGKRKRKEVVYADSLSDLQWMKAVENGEDISKFSAKGKRRDHLSSDSIAQAGDNTGAEESFEFRTESVPMANERTSEDSVHVTPSSKRFKPEGTNFLKHTYEDVGSGLNRHVLSWNTHKKKRSSYLGQGSLSDTRGQSSNGRANWN 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7092g00002 1081 Coils Coil 894 914 - -
Mupr7092g00002 1081 FunFam Chromatin structure-remodeling complex protein SYD 370 613 - -
Mupr7092g00002 1081 SMART helicmild6 719 803 IPR001650 -
Mupr7092g00002 1081 SMART SnAC_2 896 956 IPR029295 GO:0042393
Mupr7092g00002 1081 Gene3D - 610 910 IPR027417 -
Mupr7092g00002 1081 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 693 860 IPR001650 -
Mupr7092g00002 1081 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 391 557 IPR014001 -
Mupr7092g00002 1081 MobiDBLite consensus disorder prediction 298 350 - -
Mupr7092g00002 1081 Coils Coil 179 199 - -
Mupr7092g00002 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 606 857 IPR027417 -
Mupr7092g00002 1081 Pfam SNF2-related domain 382 670 IPR000330 GO:0005524|GO:0140658
Mupr7092g00002 1081 Pfam Snf2-ATP coupling, chromatin remodelling complex 897 956 IPR029295 GO:0042393
Mupr7092g00002 1081 MobiDBLite consensus disorder prediction 326 348 - -
Mupr7092g00002 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 355 604 IPR027417 -
Mupr7092g00002 1081 MobiDBLite consensus disorder prediction 1054 1081 - -
Mupr7092g00002 1081 Gene3D - 349 603 IPR038718 -
Mupr7092g00002 1081 Pfam Helicase conserved C-terminal domain 690 803 IPR001650 -
Mupr7092g00002 1081 MobiDBLite consensus disorder prediction 969 1023 - -
Mupr7092g00002 1081 MobiDBLite consensus disorder prediction 1053 1081 - -
Mupr7092g00002 1081 SMART ultradead3 375 568 IPR014001 -
Mupr7092g00002 1081 CDD SF2_C_SNF 679 814 - -
Mupr7092g00002 1081 PANTHER SNF2/RAD54 HELICASE FAMILY 119 971 - -
Mupr7092g00002 1081 FunFam Probable ATP-dependent DNA helicase CHR12 610 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7092g00002 Mupr-Chr7092 19096 29834 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7092g00002 361 830 RAD5 or RAD16-like Gene Family AT1G02670 26.868 1.10e-35 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mupr7092g00002 SNF2_N 2.7e-68 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7092g00002 - - gmx:100786280 2026.52