LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr708g00002	ATGGGCACTCCCTTGGCCTATCAAGAGCACCTCCCTGCATCGCCCTATTGGCTGAACAAAGGGGACAACGCGTGGCAGTTAACGGCAGCAACACTTGTTGGTCTTCAGAGCATGCCGGGTCTGGTGATCCTCTACGCCAGCATAGTGAAAAAAAAGTGGGCAGTGAACTCAGCTTTCATGGCTCTCTACGCCTTTGCGGCGGTTCTTATATGTTGGGTGCTAGTGTGCTACCGCATGGCCTTTGGGGAGAAACTTTTCCCCTTTTGGGGCAAGGGTGCTCCGGCACTAGGCCAGAAGTTCCTAACAAAGAGAGCCATAGTGATTGAAACCACCCACCACTACCACAATGATAAGGTTGAGTCCCCTGCTGAAGAACCCTTTTACCCCATGGCTTCGCATGTGTATTTCCAATTCACTTTTGCAGCTATTACGCTCATCTTGTTGGCTGGCTCTGTTCTTGGCCGAATGAACATCAGGGCTTGGATGGCTTTTGTGCCTCTTTGGTTAATCTTTTCTTACACTGTTGGTGCCTTCAGCCTATGGGGTGGTGGCTTTCTCTACCAATGGGGGGTAATCGATTACTCTGGCGGCTATGTCATCCACCTTTCCTCTGGAATCGCTGGCTTAACTGCTGCTTATTGGGTTGGACCAAGGTTGAAGAGTGATAGGGAGAGGTTTCCACCAAACAACGTGCTGCTCATGCTTGCGGGTGCTGGGTTGTTGTGGATGGGGTGGTCAGGGTTCAACGGTGGAGCACCCTATGCTGCAAACATTGCATCTTCAATTGCGGTGTTGAACACAAACATTTGTGCAGCCACAAGCCTCCTTGTGTGGACCACTTTGGATGTCACCTTCTTTGGGAAACCCTCGGTGATTGGAGCTGTTCAGGGCATGATGACTGGACTTGTATGCATCACCCCAGGAGCAGGGCTTGTGCAATCGTGGGCTGCTATAGTGATGGGAATATTATCTGGGAGCATTCCATGGGTGACCATGATGATTCTGCATAAAAAGTCAACCTTGTTGCAAAAGGTCAGGGTGGATGACACCCTTGGTGTGTTTCACACACATGCTGTGGCTGGGCTTTTGGGTGGTCTCCTCACAGGTCTATTAGCAGAACCAGCCCTTTGTAGACTACTATTGCCAGTGACCAACTCAAGGGGTGCATTCTATGGTGGAGGTGGTGGTGTGCAGTTCTTGAAGCAGTTGGTGGCAGCCATGTTTGTCATTGGATGGAACTTGGTGTCCACCACCATCATTCTCCTTTTCATACAGTTGTTCATACCCTTGAGGATGCCGGACGACCAGCTGGAAATCGGCGATGACGCCGTCCACGGCGAGGAAGCTTATGCCCTTTGGGGTGATGGAGAAAAATATGACCCAACTAGGCATGGTTCCTTAAACACTGGCAACACTACTGTATCACCTTATGTCAATGGTGCAAGAGGTGTCACTATAAACTTATGA	1467	0.5024	MGTPLAYQEHLPASPYWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGEKLFPFWGKGAPALGQKFLTKRAIVIETTHHYHNDKVESPAEEPFYPMASHVYFQFTFAAITLILLAGSVLGRMNIRAWMAFVPLWLIFSYTVGAFSLWGGGFLYQWGVIDYSGGYVIHLSSGIAGLTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANIASSIAVLNTNICAATSLLVWTTLDVTFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIVMGILSGSIPWVTMMILHKKSTLLQKVRVDDTLGVFHTHAVAGLLGGLLTGLLAEPALCRLLLPVTNSRGAFYGGGGGVQFLKQLVAAMFVIGWNLVSTTIILLFIQLFIPLRMPDDQLEIGDDAVHGEEAYALWGDGEKYDPTRHGSLNTGNTTVSPYVNGARGVTINL	488

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr708g00002	488	ProSitePatterns	Ammonium transporters signature.	193	218	IPR018047	GO:0008519\|GO:0016020\|GO:0072488
	Mupr708g00002	488	PRINTS	Rhesus blood group protein signature	232	250	IPR002229	GO:0005886
	Mupr708g00002	488	PRINTS	Rhesus blood group protein signature	318	336	IPR002229	GO:0005886
	Mupr708g00002	488	PRINTS	Rhesus blood group protein signature	137	153	IPR002229	GO:0005886
	Mupr708g00002	488	PRINTS	Rhesus blood group protein signature	263	285	IPR002229	GO:0005886
	Mupr708g00002	488	PANTHER	AMMONIUM TRANSPORTER MEP2	10	460	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Mupr708g00002	488	Pfam	Ammonium Transporter Family	24	450	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Mupr708g00002	488	Gene3D	Ammonium transporter AmtB like domains	5	453	IPR029020	-
	Mupr708g00002	488	FunFam	Ammonium transporter	6	453	-	-
	Mupr708g00002	488	SUPERFAMILY	Ammonium transporter	17	432	-	-
	Mupr708g00002	488	NCBIfam	ammonium transporter	22	450	IPR001905	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr708g00002	Mupr-Chr708	9353	13328	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr708g00002	130	488	Inorganic Solute Cotransporters	AT2G38290	76.454	0.0	536

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr708g00002	K03320		-	gmx:100790119	897.501