Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7083g00004 ATGGGGTCCAGTGGCAGCAAGGCCACGTCATCATCGTCTTCTTCGGGGAGTTTCAGGAAAGGTCGATCTAAGGGGCACAGAGGTTTCCCATCGAATTGTCTGGGAACATCGTCTGGATCTCGCGACATTGATAGTGACGACCAGGTTTGTGATCAGAATAAAGTGAATGGAGATGATGTTGCATACGACAGTGGCAATGAACTAGATTCAGATGAAGGAAAAACGGAGTCTTTTAGAAAGGTTAAATCTGATGAAGTACCTTCTAACATCGACCTTGAGGAGTGGGGACACACTGCATCCAGAACTGGTAGCAGCTCTGCACATTCTTCTTCAAATCAGTCCTTGAACCCTTCAACACGATTCTTTTCTCGCTTTAGCCTTGTTCCTGGTAATATAAGCTTCAGACTTAGCAGAACCACAAGTTTAGGGTCATCTAGACCTTGCCCGGTTTCTTCAACAAGTCTCTCGATATTTAACAACGAAGATGAACTCAATCTGCCTCATGGTAGCTTGATCAATAGAAATGAAACTCAACGCCGAAGCGACTTGCTTAATGCATCTTTTGTTAGTCAAGTGCCTATACAGCAGTGTCATGAAGAAGGTTCTAATAATTTAAGGTCTAATGTCCCGGCATTGGTTTCGCCTGGCAACTTGCTTAGCAGTCGCACACATTCTTCCATCCAGAATCAGAATGTTGTTAGAGATGGTGATGGCACAAGAGAACTGCCGAATGTGAACTTGTTTTCTCCAAGAATTCATACGGATACAGAAAATGTTGAGACTAGACATACTGATAGACGAAATGGAGCTCGAGAACCTGTTGAACGTAATGTTCGTTTTAGCCGAACTTTAAGTGTTGGAAGGCTCCGTGACAGAGTTCTCCGCCGATCAACATTGTCGGACTTGTCCTTTTGTCCTCTGCAAAGGGAGACAGAAATAAGAGATGCTAGTCAGGATAATGGAAGAAGAGCAGGGGAGAGAGACACAAGAGTGTCACCATCTGGTCGGAATGCTGCAAATTCTTCTACACCTAGATATCCTCTACCCAGTACACCTAGCTCCTTGTTTGGCATCCAAGACTATGAAGTTGAGACTTCACGATCTAGAGAAACTAGGTATCAGGATCTACTCGAACATAGGTCCAATTTCCTTGAACGGAGAAGAAGAATACGGTCCCAGGTCCGTGCTCTTCAGCGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACACGACAGATCATGTATCTTGTCTGGTCAACATAGAAATGGTCGTTGTGCATGCCGGATCGGTAGTCGTGATACCAATTCAAGTGATGATACCAATGCTAGAGCTAGCATATCAAGAATTGTTATGCTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCTTCTCGCCCTTCTGTGTCATCTATCGGTTCTGTTCCTGCACCTAATGAAGTTGTGGAATCATTGCCTGTCAAATTATACACAAAGTTGCACAAACATCAAGAAGAACCTGTACAATGCTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCATGCGAGTTCTGCCTTGTCATCATGAATTTCATACAACATGTATAGACAAGTGGCTGAAGGAAATTCACAGATCATCATACATTGATGCAGGAACTTTGTACATTTTCCATGTTAGATCACTTATCAGATGA 1698 0.434 MGSSGSKATSSSSSSGSFRKGRSKGHRGFPSNCLGTSSGSRDIDSDDQVCDQNKVNGDDVAYDSGNELDSDEGKTESFRKVKSDEVPSNIDLEEWGHTASRTGSSSAHSSSNQSLNPSTRFFSRFSLVPGNISFRLSRTTSLGSSRPCPVSSTSLSIFNNEDELNLPHGSLINRNETQRRSDLLNASFVSQVPIQQCHEEGSNNLRSNVPALVSPGNLLSSRTHSSIQNQNVVRDGDGTRELPNVNLFSPRIHTDTENVETRHTDRRNGAREPVERNVRFSRTLSVGRLRDRVLRRSTLSDLSFCPLQRETEIRDASQDNGRRAGERDTRVSPSGRNAANSSTPRYPLPSTPSSLFGIQDYEVETSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCACRIGSRDTNSSDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPNEVVESLPVKLYTKLHKHQEEPVQCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEIHRSSYIDAGTLYIFHVRSLIR 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 98 115 - -
Mupr7083g00004 565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 473 548 IPR013083 -
Mupr7083g00004 565 SMART ring_2 510 551 IPR001841 -
Mupr7083g00004 565 ProSiteProfiles Zinc finger RING-type profile. 510 540 IPR001841 -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 67 91 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 313 330 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 1 115 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 1 19 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 313 359 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 216 274 - -
Mupr7083g00004 565 SUPERFAMILY RING/U-box 488 544 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 216 235 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 333 359 - -
Mupr7083g00004 565 Pfam RING-like zinc finger 509 537 IPR001841 -
Mupr7083g00004 565 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 548 - -
Mupr7083g00004 565 MobiDBLite consensus disorder prediction 255 274 - -
Mupr7083g00004 565 FunFam Putative RING zinc finger domain superfamily protein 479 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7083g00004 Mupr-Chr7083 24671 29489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7083g00004 231 545 C3H Transcription Factor Family AT5G45290 62.422 5.33e-112 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7083g00004 - - gmx:100786091 890.952