Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7080g00002 ATGTGGGATCTGAATGACTCGCCCGATCAGAGAAAGGACTACGAATCTGAAGGCTGCTCTTCTTCCCTCAATGATGATAAAGGCAAGAGAGTGGGATCTCTTTCCAATTCAAGCTCCTCTGCGCTGGTTGTGGAAGATGGATCGGAAGAAGAAGACAGTGACAGAGGCGGAACTGGAACCACAGCATTGGACAAAAAAAGCAGCAAAATATTTGGCTTCGAGGTCACTCATGACCACCCACCCGTCACGCGCCAGTTTTTTCCGGTGGACGATTCCGAGCTACCCTCCGCCGCCGCCTCCTCCTTCCCGCGTGCTCACTGGGTAGGCGTCAAATTTTGTCAATCGGAAACACTCGGCGCCGGAAAAGCGGTCAAAGTGTCGGAGCCGATGAAGAAGAGTCGGCGAGGACCGCGCTCGCGGAGCTCGCAGTATAGGGGGGTTACCTTTTACAGAAGAACCGGTCGGTGGGAGTCTCATATATGGGATTGTGGAAAACAAGTGTATTTGGGTGGATTTGACACAGCACATGCAGCTGCTCGAGCGTATGATAGAGCGGCCATTAAGTTCCGCGGGGTTGAGGCAGACATTAATTTCAACATAGAAGATTATGAGGAAGATTTGAAGCAGATGAGTAATTTAACCAAGGAAGAGTTTGTGCACGTACTTCGCCGACAAAGTACTGGCTTTCCTAGAGGAAGCTCTAAATATAGAGGTGTAACTTTGCACAAGTGTGGAAGATGGGAGGCTCGAATGGGCCAATTTTTGGGCAAAAAGTACGTTTATCTGGGTCTGTTTGACACCGAGATTGAAGCTGCAAGGGCATATGACAAAGCAGCAATAAAATGCAACGGCAAAGAGGCCGTCACCAATTTTGATCCCAGCATCTATGATAATGAACTTAATTCTGAATCCTCGGGTGCTATCACTGCAGATCACAATCTGGATTTGAGTTTAGGCAGTTCGAGCTCTAAGCATAGCAATAGTCAATCCTCAGGGAATCACCTCCCAAATACTGCAAGCGATCAACATATGACACCTGAATCTAATTGGCGGAATGGGGGAATCAAGCCTAAGGCTCATCTGGTAAATATACTTCCAAAACCATGTGGTAGAAGCAACATGGAAGCATATGCAAGGGATGGACACGGGGAGAGTGAAGCCTTGAGGCTGCTAAGCCAAACTCACCTTCATTCTCCAGCCACTAAAGAAATGCATAGATATGGTCCGTATAGGTCGCCTGCAGAGCCTCAAATGCCTCACAATTTTGCACATCTTCACCCACCAAATTTTCATGTTCCTAGCAGCAGCAACGGAGGCCGTATTGGAAGTGATCTTTCGTTATCAATGTCTGATCAACAACAATGGCAAGCCGGGCCTCCACATTTGTTAGCAAGTGCTGCAGCATCATCAGGATTCCCACCGCAGATTAGACCCTCACAAGTTCTCTTGGCCAAAAGCAGTCAGACAAAGGCTATTATGACGAGAAGGACCTATCATTGTTCGTCTAAAGCTTCAAAAGGACACTGA 1527 0.4781 MWDLNDSPDQRKDYESEGCSSSLNDDKGKRVGSLSNSSSSALVVEDGSEEEDSDRGGTGTTALDKKSSKIFGFEVTHDHPPVTRQFFPVDDSELPSAAASSFPRAHWVGVKFCQSETLGAGKAVKVSEPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEIEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNSESSGAITADHNLDLSLGSSSSKHSNSQSSGNHLPNTASDQHMTPESNWRNGGIKPKAHLVNILPKPCGRSNMEAYARDGHGESEALRLLSQTHLHSPATKEMHRYGPYRSPAEPQMPHNFAHLHPPNFHVPSSSNGGRIGSDLSLSMSDQQQWQAGPPHLLASAAASSGFPPQIRPSQVLLAKSSQTKAIMTRRTYHCSSKASKGH 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7080g00002 508 CDD AP2 234 294 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 MobiDBLite consensus disorder prediction 316 355 - -
Mupr7080g00002 508 FunFam AP2-like ethylene-responsive transcription factor 234 294 - -
Mupr7080g00002 508 SUPERFAMILY DNA-binding domain 234 294 IPR016177 GO:0003677
Mupr7080g00002 508 FunFam AP2-like ethylene-responsive transcription factor 142 201 - -
Mupr7080g00002 508 Pfam AP2 domain 143 191 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 Pfam AP2 domain 234 283 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 SUPERFAMILY DNA-binding domain 142 200 IPR016177 GO:0003677
Mupr7080g00002 508 ProSiteProfiles AP2/ERF domain profile. 235 292 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 MobiDBLite consensus disorder prediction 1 24 - -
Mupr7080g00002 508 CDD AP2 143 200 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 MobiDBLite consensus disorder prediction 124 143 - -
Mupr7080g00002 508 SMART rav1_2 235 298 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 SMART rav1_2 143 205 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 MobiDBLite consensus disorder prediction 26 44 - -
Mupr7080g00002 508 MobiDBLite consensus disorder prediction 316 349 - -
Mupr7080g00002 508 MobiDBLite consensus disorder prediction 1 63 - -
Mupr7080g00002 508 Gene3D AP2/ERF domain 234 293 IPR036955 GO:0003700|GO:0006355
Mupr7080g00002 508 Gene3D AP2/ERF domain 142 201 IPR036955 GO:0003700|GO:0006355
Mupr7080g00002 508 PRINTS Ethylene responsive element binding protein signature 274 294 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 PRINTS Ethylene responsive element binding protein signature 236 247 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 ProSiteProfiles AP2/ERF domain profile. 143 199 IPR001471 GO:0003700|GO:0006355
Mupr7080g00002 508 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 80 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7080g00002 Mupr-Chr7080 17177 20590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7080g00002 1 329 AP2-EREBP Transcription Factor Family AT4G36920 70.845 2.01e-140 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mupr7080g00002 AP2 3.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7080g00002 K09284 - gmx:100786333 786.178