Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr707g00013 ATGGAAGAAAACCTACCTCCTGGGTTCAGGTTCCATCCCACAGACGAAGAGCTCATCACATGTTATTTATTAAGGAAAGTGTCCGATATTGGCTTCACATGCAAAGCGGTAGCAGTTGTTGATCTCAATAAATCTGAACCTTGGGACCTCCCAGGCAAGGCTTCCATGGGCGAGAAGGAATGGTATTTCTTCAGCTTGAAAGATCGGAAATATCCAACTGGGCTTCGAACCAACCGAGCCACCGAATCAGGGTATTGGAAAACCACAGGAAAAGATAAGGAAATTTTTGGGGGTGAAGTTTTGATAGGGATGAAGAAAACCTTAGTCTTTTATTTGGGAAGAGCTCCAAGGGGTGAGAAAAGCAACTGGGTTATGCATGAATATAGGCTAGAAAACAAGCAACCCTATAGATCTTCAAAGGTTAGTAAATGCATGCACCCCAGATATAAATTGTCTCACTACCTGCTACTAGAAGAATGGGTGGTTTGCAGAGTGTTCCAAAAAAGCTCAGCACCAAAGAAACCACAACAGACATCATCCTCTCAACCATCTCAAGAGTCCCCTACCTCAATGGTCAACGAATTTGGTGATGTTGACCTACCAAATCTAAATAGCATTGCAAATTCATCCAGTAGCTTCACCAACAATATTGCAGGACAAACTTACAATTGTGGTGGTGATCCCAGCCATGTTAACACAAACATGAACTTGACCATGAATTGGCCTTCTTCTTCAACTGAGCTTCCATCACTCACATGGCCTTCTGGATTTCTGAATCCAAACCTTTCCGTTAATTCATTGCTTCTCAAAGCATTGCAGCTTAGGAGTACTTATCAGCAAAGAGAAGCTGCGGCTAGTGATCATCATCATCATCACTTTGCAACACATGTTCCTCAAGGATTTTCTCATAATATTGTTGGAACTGATCATCATCATCACCTCACCCCAAATCTCAGTGCTTCTTCTTCCAAAGCTTTAGAATCTAATTGTGTGCCGCAGCAGGAGCAATCATTCAATATGGACTCCATTTGGTGA 1035 0.4242 MEENLPPGFRFHPTDEELITCYLLRKVSDIGFTCKAVAVVDLNKSEPWDLPGKASMGEKEWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKEIFGGEVLIGMKKTLVFYLGRAPRGEKSNWVMHEYRLENKQPYRSSKVSKCMHPRYKLSHYLLLEEWVVCRVFQKSSAPKKPQQTSSSQPSQESPTSMVNEFGDVDLPNLNSIANSSSSFTNNIAGQTYNCGGDPSHVNTNMNLTMNWPSSSTELPSLTWPSGFLNPNLSVNSLLLKALQLRSTYQQREAAASDHHHHHFATHVPQGFSHNIVGTDHHHHLTPNLSASSSKALESNCVPQQEQSFNMDSIW 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr707g00013 344 MobiDBLite consensus disorder prediction 309 344 - -
Mupr707g00013 344 MobiDBLite consensus disorder prediction 171 194 - -
Mupr707g00013 344 FunFam NAC domain-containing protein 100-like 14 172 - -
Mupr707g00013 344 MobiDBLite consensus disorder prediction 314 344 - -
Mupr707g00013 344 SUPERFAMILY NAC domain 3 168 IPR036093 GO:0003677|GO:0006355
Mupr707g00013 344 Gene3D NAC domain 14 172 IPR036093 GO:0003677|GO:0006355
Mupr707g00013 344 MobiDBLite consensus disorder prediction 171 192 - -
Mupr707g00013 344 ProSiteProfiles NAC domain profile. 5 168 IPR003441 GO:0003677|GO:0006355
Mupr707g00013 344 Pfam No apical meristem (NAM) protein 6 130 IPR003441 GO:0003677|GO:0006355
Mupr707g00013 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr707g00013 Mupr-Chr707 69167 72196 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr707g00013 1 344 NAC Transcription Factor Family AT3G18400 55.710 4.97e-112 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr707g00013 NAM 2.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr707g00013 - - gmx:100775645 508.834