Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr707g00005 ATGAAAGAGGCAGGTGCCTTGGGAGCGAAGACAGCGCGAGCCTGCGATAGCTGCATCCGCAGAAGAGCAAGGTGGTTCTGTGCAGCAGACGATGCTTTTCTCTGCCACGGCTGCGACACTTTGGTTCACTCCGCGAACCAGTTAGCAAGCAGGCACGAAAGGGTTCGGCTTCAAACCGCTTCCTCTAAGGTAACCACCACCGCGCACGCATGGCACAGTGGATTCACTCGCAAGGCAAGAACCCCGCGTCACAACAACACCAAGCACTTCGCACTGCAACAACGTCTCAAAGACGAAGTTCTCTTCAACAACACCAGTGTTCTTCCCCTCGTGCCGGAGCTCGGAGGGGAAGAACAAGAACCTGCGGTTGTTGAGACCGAGGAACAGATTCTATGTCGCGTGCCCGTGTTTGACCCTTTTGATCTGAGAACCGATGACTTGGACAGTTTTTCTGATATGGATTTTGCTGAGTTTGCTGCTGATGTTGAAAGCCTACTCGATAAAGAAGACGATGAAGTAAGTGCGTGTATGGGAGGGGGAGGAGGAGTTCAAGGTGCAATGGCGAAGGTTAAGGATGAAGACGAAGTTGATGGTGATGTAGCGTGTTATCTGGAAGCGGTTTTTGACATGACAAATGATGATGCCTTTCGTTGGAATAATATTGAGTCTGTGCTTTCGGGTGAACGGGAAGAGAAGGAGGGTGTGGTGGCGTGTGATGGTGGGGTTAGTGAAGAAGGGGGAACAAAGAGAGACATATTTTTGAGACTAAATTATGATGAAGTTATTACTGCTTGGGCTAGTCAAGGTTCTTCTCCATGGACAACTCCAAACCCACCTAAGTTCAACTCTGATTATGATTTCTGCTTGGGTTTGAGTGGTGCAGATGGGGAAGTAAGAAGCTTAAGGGGGCACCTAGATGGTGGAAGAGAAGCAAGAGTGTCGAGGTATAGAGAGAAGAGAAGGACACGTTTGTTTGCAAAGAAGATAAGATATGAAGTAAGGAAGTTGAACGCGGAGAAGAGGCCTAGAATGAAAGGTCGTTTTGTGAAGAGGACATGCTTTGTTGGAGCCAATGCTTTTCCTGCTTACCACTGA 1095 0.4877 MKEAGALGAKTARACDSCIRRRARWFCAADDAFLCHGCDTLVHSANQLASRHERVRLQTASSKVTTTAHAWHSGFTRKARTPRHNNTKHFALQQRLKDEVLFNNTSVLPLVPELGGEEQEPAVVETEEQILCRVPVFDPFDLRTDDLDSFSDMDFAEFAADVESLLDKEDDEVSACMGGGGGVQGAMAKVKDEDEVDGDVACYLEAVFDMTNDDAFRWNNIESVLSGEREEKEGVVACDGGVSEEGGTKRDIFLRLNYDEVITAWASQGSSPWTTPNPPKFNSDYDFCLGLSGADGEVRSLRGHLDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTCFVGANAFPAYH 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr707g00005 364 SMART bboxneu5 10 57 IPR000315 GO:0008270
Mupr707g00005 364 Pfam CCT motif 309 351 IPR010402 GO:0005515
Mupr707g00005 364 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 6 352 - -
Mupr707g00005 364 Pfam B-box zinc finger 12 55 IPR000315 GO:0008270
Mupr707g00005 364 ProSiteProfiles CCT domain profile. 309 351 IPR010402 GO:0005515
Mupr707g00005 364 CDD Bbox1_BBX-like 14 57 - -
Mupr707g00005 364 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr707g00005 Mupr-Chr707 20897 22475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr707g00005 4 351 C2C2-CO-like Transcription Factor Family AT1G25440 41.943 6.61e-84 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr707g00005 zf-B_box 3.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr707g00005 - - gmx:100812563 652.514