Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr707g00001 ATGCGAAGCTGTGAAAAGAAATCTTCGAAACAAGTAACAGAGCCTGAGAAAGGAAAAGAAAAGGTTGCAGATGCAGCGAAGAAGGAAGAAGCTGAGCCTGTGAAGAGACTCATACGGATTACATTCACTGACCCAGACCCAGATGCTACAGATTCTTCCAGCGGAGAAGATAGTAAAGTATCAAATGGTCCAAAGCGATATGTGACGGAGGTTGAGATTTCAAGCATGGTAGTTAACGACGATGCTAAACCCCGTCCCCATGAACAAAAACGCCCCTCATCAAGCATGTTTAGAGGTGTTAGACGCAGAAAGTGGGGGACATATGCAGCTGAGATTCGAGACCCAATTCAAAAGCGTCGTGTGTGGCTTGGTACGTTTAATACTGAGGAAGAGGCTGCAATTGCTTATAACGAAAAGAGGGAAGAGTTTGAAAGGCAAAAGGCTCTTCTAAAAAGAGATGATTCTGAGGCTGCCAAAAAAGAAGAGTTGAATTATTCGGAAGAATCAAATTCAGGGAAAACCGTTCGTGAAGAATCAATTACACCCTCGTTGGCAAAGGATGATCTGAATTTGGAGGAACAATGA 585 0.4342 MRSCEKKSSKQVTEPEKGKEKVADAAKKEEAEPVKRLIRITFTDPDPDATDSSSGEDSKVSNGPKRYVTEVEISSMVVNDDAKPRPHEQKRPSSSMFRGVRRRKWGTYAAEIRDPIQKRRVWLGTFNTEEEAAIAYNEKREEFERQKALLKRDDSEAAKKEELNYSEESNSGKTVREESITPSLAKDDLNLEEQ 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr707g00001 194 SMART rav1_2 96 159 IPR001471 GO:0003700|GO:0006355
Mupr707g00001 194 MobiDBLite consensus disorder prediction 1 42 - -
Mupr707g00001 194 ProSiteProfiles AP2/ERF domain profile. 96 153 IPR001471 GO:0003700|GO:0006355
Mupr707g00001 194 SUPERFAMILY DNA-binding domain 95 146 IPR016177 GO:0003677
Mupr707g00001 194 MobiDBLite consensus disorder prediction 81 95 - -
Mupr707g00001 194 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 35 163 - -
Mupr707g00001 194 MobiDBLite consensus disorder prediction 46 60 - -
Mupr707g00001 194 Gene3D AP2/ERF domain 96 151 IPR036955 GO:0003700|GO:0006355
Mupr707g00001 194 MobiDBLite consensus disorder prediction 1 100 - -
Mupr707g00001 194 Coils Coil 126 153 - -
Mupr707g00001 194 CDD AP2 95 138 IPR001471 GO:0003700|GO:0006355
Mupr707g00001 194 MobiDBLite consensus disorder prediction 143 194 - -
Mupr707g00001 194 PRINTS Ethylene responsive element binding protein signature 119 135 IPR001471 GO:0003700|GO:0006355
Mupr707g00001 194 PRINTS Ethylene responsive element binding protein signature 97 108 IPR001471 GO:0003700|GO:0006355
Mupr707g00001 194 Pfam AP2 domain 97 145 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr707g00001 Mupr-Chr707 8336 9243 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr707g00001 64 152 AP2-EREBP Transcription Factor Family AT1G49120 44.086 7.13e-20 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr707g00001 AP2 1.3e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr707g00001 - - csv:101212855 115.161