Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7078g00006 ATGGATGTTCATAGCAGCACAGAATTGAATGATACTTCACACATGCTTCCACCTCCCCCAGGCACTTTTGTAGATCGTGAAGAACTCATTCAACATGTTGGAGACTTTGCTGTGTCCCAGGGGTATGTGGTGACTATCAAGCAATCCAAGAGGGACAAAGTAGTTATACTTGGCTGTGACAGAGGAGGTGTTTATCGTAACCGGCGAAAACCTGCTGAGGAGTCCTCAGAGTCAGCGGAACATAGTCGTAAAAGAAAAACTGGTTCTCGTCTAACAAATTGTCCTTTTGAAGCTGTGGGCAAGAAAGATGATGGCTTGTGGGTACTCACCATAAAAAATGGAACACACAATCATGAACCCTTAAAGGACATGTCAGAACATCCTTCTGCCCGTCGCTTCACAGAGAGAGAAGTTTTGCTCATTAAAGAAATGACAGAAGCTGGGTTGAAACCTCGACAAATTCTAAAGAGGCTGAGACAAAGCAATCCAGAACTTTTATCAACCCCAAAGCATGTTTATAATGTTAAAGCTAAGCTTAGACAAGGAAACACGAATGTTAGGAATTTTAAGTCACTGAAACCTGAGAAGTCTGCTGTGAGAAACAATTATCTTGCTGTAATTGAACCATTGTGGAGGCAGTGCAACCCTCCGAGGGTTCCCAATCTTATTGGAGGAAGATTTGTTGATTCACAGTCATGTGCATCAATTGACATTCTAAACCCTGCAAGCCAGCAAGTTGTTTCTCAAGTTCCAATGACTACAAACGAGGAGTTCAAAGCAGCAGTATTTTCTGCAAAACGGGCCTTTTCATTGTGGCGTAACACACCAGTTACCACTAGGCAGAGAATCATGTTTAAGTTCCAAGAGCTTATTTGTAGAGACATTGATAAGATTGCTATGAATATTAGTACTGAACATGGAAAAACTCTGCGAGATGCACATGATGATGTGTTATGTGGGCTAGAGGTTGTTGAACATGCTTGTGGTATGGGAAATGTGCTAAAGGGAGATTTTGTTCCCAATGTGTCCAATGGAATAGACAAGTACAGCATTAGAGAGCCACTTGGTGTTTGTGCTGGTATCTGCCCTTCTGATTTTCCGGCTATGATTCCACTATGGATGTTTCCTATTGCTGTCACATGTGGCAATACATTTATTCTAAAGCCGTCAGAGAAGAATCCAGGGGCATCTGTGATGCTGGCAGAGTTAGCAATTGAGGCTGGTTTACCTAATGGTGTGTTAAATATTGTTCATGGTACAAATGACATTGCCAATGCTATCTGTGATGATGATGATATAAAGGCTGTCTCCTTTGTTGGTTCAAATACAGTTGGTGCATATGTATACGCGAGAGCATCTACTAAAGGTAAACGTGTGCAGTCCAATATTGGAGCCAAAAATCATGCTGTCGTAATGCCTGATGCAAGAATGGATGCTACTTTGAAAGCTTTGGTTACAGCTGGTTTTGGTGCTGCTGGACAGAAGTGCACAGCACTGAGTGCTGTTGTTTTTGTTGGAAGTTTCAGTCAATGGAAAGATAAATTAGTAGAGCATGCCAAAGTGCTTAAGGTCAATGCTGGAACAGAACCAGACGCAGACCTTGGTCCTGTTATTAGCAAACAGGCAAAGGAACACACTTGCAGATTGATTCAAACAGGAGTGGAATCTGGTGCAAAACTAGTGCTTGATGGGAGAAATATTGTGGTTCCGGGATATGAACATGGAAACTTCATTGGTCCTACCATCTTGTCAGATGTCACAGTTGATATGGGATTCTACAAGGAGGAGATTCTTGGCCCAGTTCTTCTGTGTATGGAGGTTGACAGCATACAAGAGGCCATAAACATAGTCAATAGCAACAAATATGGTAATGGAGCATCCATTTTTACAACTTCTAATGCTGCGGCAAGAAAATTCCAGACTGAGGTTGAAGTTGGACAGGTTGGCATAAATGTCCCAATCTCTGTTTCATTGCCCTTTTCTTCATTTATTAGCTCCAGTCCATCTTTTGTTGGTGATTTGAACTTTGATGGCAGAGGTGGAATTCAGTTTTACACGCAGATTAAGACGGTTGCTAAACAATGGACTGACTCATTATATGGAGATGAAGCAACTCTTGAATTACCTGCGTTATTTGGTTCTGATCTTATAAGCTGTGGAGCTAGCATTTCTGCTATGTCCAGTCTTCCATGGAGCTTACAAGCTGATACAACAGAGCTCCATACTCTAGCACTTGGTTTCATGGGCATTGTTCTCAGCATTTCCAGAGCATCTTCAAGTTTGCCTGACCTTCCAAGAAGATCGACTAGGCATGCATAA 2319 0.4204 MDVHSSTELNDTSHMLPPPPGTFVDREELIQHVGDFAVSQGYVVTIKQSKRDKVVILGCDRGGVYRNRRKPAEESSESAEHSRKRKTGSRLTNCPFEAVGKKDDGLWVLTIKNGTHNHEPLKDMSEHPSARRFTEREVLLIKEMTEAGLKPRQILKRLRQSNPELLSTPKHVYNVKAKLRQGNTNVRNFKSLKPEKSAVRNNYLAVIEPLWRQCNPPRVPNLIGGRFVDSQSCASIDILNPASQQVVSQVPMTTNEEFKAAVFSAKRAFSLWRNTPVTTRQRIMFKFQELICRDIDKIAMNISTEHGKTLRDAHDDVLCGLEVVEHACGMGNVLKGDFVPNVSNGIDKYSIREPLGVCAGICPSDFPAMIPLWMFPIAVTCGNTFILKPSEKNPGASVMLAELAIEAGLPNGVLNIVHGTNDIANAICDDDDIKAVSFVGSNTVGAYVYARASTKGKRVQSNIGAKNHAVVMPDARMDATLKALVTAGFGAAGQKCTALSAVVFVGSFSQWKDKLVEHAKVLKVNAGTEPDADLGPVISKQAKEHTCRLIQTGVESGAKLVLDGRNIVVPGYEHGNFIGPTILSDVTVDMGFYKEEILGPVLLCMEVDSIQEAINIVNSNKYGNGASIFTTSNAAARKFQTEVEVGQVGINVPISVSLPFSSFISSSPSFVGDLNFDGRGGIQFYTQIKTVAKQWTDSLYGDEATLELPALFGSDLISCGASISAMSSLPWSLQADTTELHTLALGFMGIVLSISRASSSLPDLPRRSTRHA 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7078g00006 772 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 464 664 - -
Mupr7078g00006 772 Pfam Aldehyde dehydrogenase family 227 691 IPR015590 GO:0016491
Mupr7078g00006 772 MobiDBLite consensus disorder prediction 67 87 - -
Mupr7078g00006 772 SUPERFAMILY ALDH-like 209 697 IPR016161 GO:0016491
Mupr7078g00006 772 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 52 709 IPR010061 GO:0004491
Mupr7078g00006 772 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 464 661 IPR016163 GO:0016620
Mupr7078g00006 772 MobiDBLite consensus disorder prediction 1 21 - -
Mupr7078g00006 772 CDD ALDH_F6_MMSDH 219 695 IPR010061 GO:0004491
Mupr7078g00006 772 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 221 695 IPR010061 GO:0004491
Mupr7078g00006 772 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 223 663 IPR016162 GO:0016491
Mupr7078g00006 772 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 489 500 IPR016160 GO:0016491
Mupr7078g00006 772 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 223 470 - -
Mupr7078g00006 772 MobiDBLite consensus disorder prediction 67 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7078g00006 Mupr-Chr7078 18244 29772 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7078g00006 188 679 Aldehyde Dehydrogenase Gene Family AT2G14170 70.791 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7078g00006 K00140 - cave:132177147 1132.09