Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7053g00005 ATGGCCGATTCCAAGGAGAAGAATCGCAAATTTGTGGAGACCATTGAACTCCAAATTGGATTGAAAAACTATGATCCACAGAAGGACAAGCGTTTCAGCGGCTCTGTCAAGTTGCCCCACATCCCTCGCCCCAAGATGAAAATTTGCATGCTTGGTGATGCTCAACATGTTGAAGAGGCGGAGAAGATAGGATTGGACTGGATGGATGTGGAAGCCTTGAAGAAGCTAAACAAGAATAAGAAGTTGGTGAAGAAGCTAGCTAAAAAATACCATGCCTTTTTAGCTTCTGAAGCAGTCATTAAGCAGATTCCACGTCTTTTGGGTCCCGGGAAGTTCCCTACACTTGTTACTCACCAGGAAACTCTTGAGTCAAAGGTTAACGAGTCTAAGGCTATGGTCAAATTTCAACTTAAGAAGGTGCTCTGCATGGGAGTAGCTGTGGGCAATGTTAGTATGGAGGAAAAGCAAATCTTCCAAAATGTACAACTGAGTGTTAACTTCCTGGTATCTTTGTTGAAAAAGAACTGGCAGAATGTGAGTTGTTCACTCATAATATTTAGTAAAACCATTGCATCTGTTACACCCTTTTTTATTGTGCTTTTCTTTACAGTTGCATAT 618 0.4142 MADSKEKNRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDWMDVEALKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGKFPTLVTHQETLESKVNESKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQLSVNFLVSLLKKNWQNVSCSLIIFSKTIASVTPFFIVLFFTVAY 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7053g00005 206 PIRSF RPL1p_RPL1a_RPL10e_RPL1o 2 191 IPR002143 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Mupr7053g00005 206 Gene3D - 49 133 IPR016095 -
Mupr7053g00005 206 Pfam Ribosomal protein L1p/L10e family 6 180 IPR028364 -
Mupr7053g00005 206 FunFam Ribosomal protein 116 192 - -
Mupr7053g00005 206 FunFam Ribosomal protein L10a 1 103 - -
Mupr7053g00005 206 CDD Ribosomal_L1 5 179 IPR028364 -
Mupr7053g00005 206 SUPERFAMILY Ribosomal protein L1 6 183 IPR023674 -
Mupr7053g00005 206 FunFam Ribosomal protein 49 133 - -
Mupr7053g00005 206 Gene3D - 5 184 - -
Mupr7053g00005 206 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 5 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7053g00005 Mupr-Chr7053 36783 38080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7053g00005 2 181 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 87.568 2.02e-103 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7053g00005 K02865 - gmx:100499715 332.028