Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7049g00002 ATGGTGCCACCAAGCTTTGGTTGGGGTAGTTTTCATTTCGTGAAGTGCGTTGGCAAAGTTAAGGCTCTTGTTGGTGGTGTCAGAACCAACATGGAAGCACCGGAGGATCTCTCTTTTGGGGGATCCAAAGATCACGCCAACATTGTCAAAGGAAAAAGAACCAAAAGGGTAAGGCCACAATCCCCTGTCCCCTTCTCCATCACTGCTAATTCTTCAACCGGAGAAGGAGAAAGACAAGAAGATTGCTACAATGGTAATGATCACAACAACAACAAAAATATTGATATTAATAACAACAACAACAGCTCTCCCACCACTTCTTCGGCAGGATTACAAGACAGCACCGATGAAGAGGAGGACATGGCAAATTGTCTCATCCTCCTGGCACAAGGACAATCCCGGGAAACGCCAAAACACGCCGAGGAAGATGGTGGCATGAATTACGCCAAGTACAGCAGTAGAAAATTCTTGGAAGCTGCTACCTTGGGGTCTAACAGGGCAGGGTACTATGTCTATGAATGCAAGACATGTAACAGAACTTTCCCTTCATTTCAAGCACTTGGAGGCCACAGGGCCAGTCACAAGAAGCCCAAGGCAATCATTGCCATTGGCCAAGAGAAAAGGCAGCAACACCTTTTGTCATCAGATGAGGAAGAGTTTCAATTGAAGACCAACAAATCACCATTTTCCCTTCAACTCAACAATAATAATAGGGGAAATTTGTACAGCAGCAACAACAACAAGTCCAAGGTGCATGAGTGCTCCATCTGTGGTGCTGAATTCACGTCAGGTCAGGCATTGGGAGGCCATATGAGACGTCACCGAGCACCTGTTGGAACCCCCACCACACTCTCCTTCACCCCATTGCCTTTGGAACCAGAAGAAGATCATCCCAGAAAGAAAAGGAATGTCTTGAATTTGGATTTGGATCTCAACCTTCCTGCCCCAGAAGATGATCAAAGAGAATCCAAGTTTGTCTTTGCATCCAAGCAACATGGACAGAAACAACAGCAACAGCAACAGCAGCAGAAGCAGCAACAACAACAAACAAGTCTTGTCTTCCCCGCCCCAGCTTTGTTAATTTCCTACTCAATACACCTAAGCAACCCCACGAAACCAAACCATCTAGTGCTTCATGATTCACAGCCCTCAATTTCTCCTCCGAATCTTCGTGCTTGGCTTAGATACAGCTAA 1194 0.4598 MVPPSFGWGSFHFVKCVGKVKALVGGVRTNMEAPEDLSFGGSKDHANIVKGKRTKRVRPQSPVPFSITANSSTGEGERQEDCYNGNDHNNNKNIDINNNNNSSPTTSSAGLQDSTDEEEDMANCLILLAQGQSRETPKHAEEDGGMNYAKYSSRKFLEAATLGSNRAGYYVYECKTCNRTFPSFQALGGHRASHKKPKAIIAIGQEKRQQHLLSSDEEEFQLKTNKSPFSLQLNNNNRGNLYSSNNNKSKVHECSICGAEFTSGQALGGHMRRHRAPVGTPTTLSFTPLPLEPEEDHPRKKRNVLNLDLDLNLPAPEDDQRESKFVFASKQHGQKQQQQQQQQKQQQQQTSLVFPAPALLISYSIHLSNPTKPNHLVLHDSQPSISPPNLRAWLRYS 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7049g00002 397 ProSitePatterns Zinc finger C2H2 type domain signature. 254 274 IPR013087 -
Mupr7049g00002 397 SMART c2h2final6 172 194 IPR013087 -
Mupr7049g00002 397 SMART c2h2final6 252 274 IPR013087 -
Mupr7049g00002 397 ProSitePatterns Zinc finger C2H2 type domain signature. 174 194 IPR013087 -
Mupr7049g00002 397 ProSiteProfiles Zinc finger C2H2 type domain profile. 252 274 IPR013087 -
Mupr7049g00002 397 ProSiteProfiles Zinc finger C2H2 type domain profile. 172 199 IPR013087 -
Mupr7049g00002 397 MobiDBLite consensus disorder prediction 61 79 - -
Mupr7049g00002 397 Gene3D Classic Zinc Finger 233 283 - -
Mupr7049g00002 397 Gene3D Classic Zinc Finger 151 230 - -
Mupr7049g00002 397 MobiDBLite consensus disorder prediction 266 300 - -
Mupr7049g00002 397 MobiDBLite consensus disorder prediction 86 112 - -
Mupr7049g00002 397 SUPERFAMILY beta-beta-alpha zinc fingers 171 274 IPR036236 -
Mupr7049g00002 397 MobiDBLite consensus disorder prediction 327 350 - -
Mupr7049g00002 397 PANTHER ZINC FINGER PROTEIN ZAT5 102 340 - -
Mupr7049g00002 397 MobiDBLite consensus disorder prediction 329 350 - -
Mupr7049g00002 397 Pfam C2H2-type zinc finger 171 197 - -
Mupr7049g00002 397 Pfam C2H2-type zinc finger 251 277 - -
Mupr7049g00002 397 MobiDBLite consensus disorder prediction 51 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7049g00002 Mupr-Chr7049 6523 8750 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7049g00002 31 360 C2H2 Transcription Factor Family AT5G04390 43.631 2.30e-79 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr7049g00002 zf-C2H2_6 8.2e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7049g00002 - - gmx:100819786 489.96