LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr7033g00002	ATGACTAGGCAAGCCTACGTGGACGGCCACACCCTCGCGGCCGCCGGCATTATCGGCCATGACGGCACTGTCTGGGCGCAAAGCTCCAAATTTCCTCAGTATAATGGTAAAGACATTGAAGGCATTATGAAAGAATTTGATGAACCAGGGAGCCTCACCCCAACGGGTTTGCAGCTGGGTGATGCCAAATACACGATCATCCAAGGACAACCTGGAGTTGCCATCCGCGCCAACAAGGGTGCTGGCGGGATCACTGTGAAGAAAACTAATCAAGCTGTGGTGATTGGTATCTATGATGAACCTCTGACCCCAGGACAGTGCAACATGATTGTTGAGAGGTTGGGAGATTATTTGATTGACCAGGGCCTCTAG	372	0.5134	MTRQAYVDGHTLAAAGIIGHDGTVWAQSSKFPQYNGKDIEGIMKEFDEPGSLTPTGLQLGDAKYTIIQGQPGVAIRANKGAGGITVKKTNQAVVIGIYDEPLTPGQCNMIVERLGDYLIDQGL	123

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr7033g00002	123	SUPERFAMILY	Profilin (actin-binding protein)	4	122	IPR036140	-
	Mupr7033g00002	123	Gene3D	Dynein light chain 2a, cytoplasmic	2	123	-	-
	Mupr7033g00002	123	CDD	PROF	4	122	IPR005455	GO:0003779
	Mupr7033g00002	123	FunFam	Profilin	1	123	-	-
	Mupr7033g00002	123	PANTHER	PROFILIN	3	122	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	109	122	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	96	109	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	1	7	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	19	32	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	44	58	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	63	72	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Plant profilin signature	76	91	IPR005455	GO:0003779
	Mupr7033g00002	123	SMART	prof_2	1	123	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Profilin signature	92	105	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Profilin signature	105	122	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Profilin signature	56	70	IPR005455	GO:0003779
	Mupr7033g00002	123	PRINTS	Profilin signature	3	12	IPR005455	GO:0003779
	Mupr7033g00002	123	Pfam	Profilin	4	122	IPR005455	GO:0003779

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr7033g00002	Mupr-Chr7033	38846	39877	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr7033g00002	1	123	Cytoskeleton Gene Families	AT4G29340	61.194	6.42e-59	176

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr7033g00002	K05759		-	gmx:100809393	196.438