Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7033g00001 ATGGATGAGAGGTCAAGAAACGAGGCATCATCTCCTCAGCTGTTGGATTTGATCCCAAACGAGAGAGAGTGGCAGATGAACAAAGGGAAGTGTTCAGAAGAGAGGAAACTTGAACTAAGGCTAGGTCCACCCGGTGAGGAGTGGTCTCTGAGTGGCAAAACGAAGACAGAAAGAGAAGAGTCTCTACTCTCTCTTGGTTGCTTCTCTCATGGAATACTGAGCCCTAACAAGGGGTTCCAAAGCAAGGCCTCACCATGGCAAGGGTACCACCACCAGGGTAACAACAAAACTTCATCATTTCTTCAGTTCCCATCCACAGCCCCACCTGTGATGGGAAAAGATGCATCTCCTAAGGTGGTAGAGTTGCAGAATGCTGATAGCAAAGTGTTCTCTCCCTCTTCTGCAAATACAGCTGTGTCCCAGCCCAACACCTCTCAGAAAAGAACTGCTCCTGCTCCAGTGGTTGGGTGGCCCCCAATTCGTTCCTTCAGGAAGAACCTTGCAAGCAGCAGCGCTTCTAAGCCACCTCCTGAGTCTCAGCCTGAGCAGCATAACAAGGTTGCTGGTAAAAAACCTGTTGACAACTATGCTAAAGGTTTGTTTGTGAAGATCAACATGGATGGAGTTCCAATAGGGAGAAAGGTGGACCTCAATGCTTACGACAGCTACGAAAATCTCTCTTCTGCTGTGGATGAGCTATTCAGAGGCCTTCTTGCTGCTCAAAGAGATTCTGGTGGAGTTCACATCAAGCAGGAGGAAGAGAAAGCGATTACAGGTTTATTGGATGGAAAAGGGGAGTATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTTGTATCAACAGTGAAGAGGCTACGGGTGTTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGGCAGTAAGCAAGACAAGATACCACTTGACTCGGCAATGAAATGA 972 0.4743 MDERSRNEASSPQLLDLIPNEREWQMNKGKCSEERKLELRLGPPGEEWSLSGKTKTEREESLLSLGCFSHGILSPNKGFQSKASPWQGYHHQGNNKTSSFLQFPSTAPPVMGKDASPKVVELQNADSKVFSPSSANTAVSQPNTSQKRTAPAPVVGWPPIRSFRKNLASSSASKPPPESQPEQHNKVAGKKPVDNYAKGLFVKINMDGVPIGRKVDLNAYDSYENLSSAVDELFRGLLAAQRDSGGVHIKQEEEKAITGLLDGKGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGSKQDKIPLDSAMK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7033g00001 323 ProSiteProfiles PB1 domain profile. 199 301 IPR000270 GO:0005515
Mupr7033g00001 323 MobiDBLite consensus disorder prediction 79 190 - -
Mupr7033g00001 323 MobiDBLite consensus disorder prediction 79 105 - -
Mupr7033g00001 323 MobiDBLite consensus disorder prediction 164 180 - -
Mupr7033g00001 323 Gene3D - 194 312 - -
Mupr7033g00001 323 SUPERFAMILY CAD & PB1 domains 196 298 - -
Mupr7033g00001 323 Pfam AUX/IAA family 37 306 IPR033389 -
Mupr7033g00001 323 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 34 304 IPR003311 GO:0005634|GO:0006355
Mupr7033g00001 323 FunFam Auxin-responsive protein 194 313 - -
Mupr7033g00001 323 MobiDBLite consensus disorder prediction 126 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7033g00001 Mupr-Chr7033 6876 9860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7033g00001 202 312 B3 DNA Binding Superfamily AT4G23980 34.234 1.39e-14 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr7033g00001 AUX_IAA 7.5e-72 CL0072