Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7016g00001 ATGGAAGAAGGTTTTGACCATGGAAGTAAGAAGGGGTTCTGGAATGCGGAGGAAGACTCACTTCTAACTGATTATGTTAAGAAGCATGGAATGGGGAAGTGGAATCGGATTCCTAAAGTCACAGGGTTGAAGAGAAGCGGCAAAAGTTGCAGACTCAGGTGGATGAATTATCTGTGTCCTAAAGTTAAGCGTGGAGATTTCTCAGAGGAAGAACAAGACCTTGTTATTCGGCTCCACACCCTCCTTGGAAATAGGTGGTCTTTGATAGCGGGGAGGATTCCTGGGAGGACAGACAACCAGGTGAAGAACTTTTGGAACACTCATTTAAGCAAGAAGCTTGGCGTTAAGAAGAAAAAGAGCAAAGTTTGTGGCACTATAGTTGAAGCAAAGAGTAATTGCAATAGGGCATCAAAGGGTACGGGGCATTCCATTGGTGAAGGTGAAAAGCTTGTCCATGAAAGCTTGAGTGGTGATCTAATCGACTTCGCAAGCATGCATGAGGGGAATATCGTGACAGATGATTTTGGGTGTACCTTTTCTTTTGCCAATAGTGTGTTTGATCTATGCACTCCTTACTTCACCGACTCTTTTCACGAC 597 0.4422 MEEGFDHGSKKGFWNAEEDSLLTDYVKKHGMGKWNRIPKVTGLKRSGKSCRLRWMNYLCPKVKRGDFSEEEQDLVIRLHTLLGNRWSLIAGRIPGRTDNQVKNFWNTHLSKKLGVKKKKSKVCGTIVEAKSNCNRASKGTGHSIGEGEKLVHESLSGDLIDFASMHEGNIVTDDFGCTFSFANSVFDLCTPYFTDSFHD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7016g00001 199 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Mupr7016g00001 199 CDD SANT 14 58 IPR001005 -
Mupr7016g00001 199 SUPERFAMILY Homeodomain-like 9 105 IPR009057 -
Mupr7016g00001 199 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 8 133 - -
Mupr7016g00001 199 ProSiteProfiles Myb-like domain profile. 6 58 IPR001005 -
Mupr7016g00001 199 Pfam Myb-like DNA-binding domain 12 58 IPR001005 -
Mupr7016g00001 199 Pfam Myb-like DNA-binding domain 64 109 IPR001005 -
Mupr7016g00001 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 113 IPR017930 -
Mupr7016g00001 199 CDD SANT 67 108 IPR001005 -
Mupr7016g00001 199 SMART sant 10 60 IPR001005 -
Mupr7016g00001 199 SMART sant 63 111 IPR001005 -
Mupr7016g00001 199 FunFam Transcription factor WER 65 138 - -
Mupr7016g00001 199 Gene3D - 66 136 - -
Mupr7016g00001 199 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 58 IPR017930 -
Mupr7016g00001 199 FunFam MYB-related transcription factor 10 63 - -
Mupr7016g00001 199 Gene3D - 11 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7016g00001 Mupr-Chr7016 491 1475 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7016g00001 3 154 MYB Transcription Factor Family AT5G40330 56.173 2.45e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr7016g00001 Myb_DNA-binding 9.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7016g00001 K09422 - cave:132175782 205.297