Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7006g00001 ATGTTTCCTTTACAACGAGGCAATGAGCTGGTTATCCAGTTTTCTAATAGCCCCCACCAGCAGCAAGACAAAAAAATCTCAGAAGATCTGATTCTGGATGATTATGCTTCTCTGTATGCCAATGATTCTGATACAAAAATCACTCGTAGCCAACCAAAGAAACTTTTTCATGGGGCAAATAAGAAGAACCAGGACTCTAACGAACATAACAAGAAGATGATTCACAAGGAGATTGAAAGGCAAAGGAGACAAGAAATGACTACCTTCTATGCCTCTCTTAGATCCCTTCTCCCTCTTGAGTTCGTCAAGGGAAAGCGTTCAATATCTGACCACATGAACGGGGCAGTGAATTACATAAAGCACATGCAGCACAACATCAAAGAACTTGGTGCCAAGAGAGATGAGCTTAAAAAACTCTCCAACTATTCCAAAATGGAAAATAACCATGAGGGCTTGCATACATCTTGCAACTTTACTGTCCACGAGAATAATGGTGTTATGGGAATCGAAATCACCAGTGCCTTCAGAGAGGAAAGGCCTAAACTTTCAAAGTTACTACAGTTACTGGTTGAAGAAGGTCTTGAAGTTGTTAGTTGCCTTTCAACAGAAGTCAATGGCAGATTACTCCACAGTGTGCAGTGTGAGGTTAACAATTCCAACTGTGTAGATCTATCTGAGCTGAGAAAGAAAGTTTCCAATGCATTTCCACCATTTATATATGTTCAGAGGAAATTTTGTCAAACATAA 747 0.3989 MFPLQRGNELVIQFSNSPHQQQDKKISEDLILDDYASLYANDSDTKITRSQPKKLFHGANKKNQDSNEHNKKMIHKEIERQRRQEMTTFYASLRSLLPLEFVKGKRSISDHMNGAVNYIKHMQHNIKELGAKRDELKKLSNYSKMENNHEGLHTSCNFTVHENNGVMGIEITSAFREERPKLSKLLQLLVEEGLEVVSCLSTEVNGRLLHSVQCEVNNSNCVDLSELRKKVSNAFPPFIYVQRKFCQT 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7006g00001 248 CDD bHLH_AtORG2_like 71 141 - -
Mupr7006g00001 248 Gene3D - 61 154 IPR036638 GO:0046983
Mupr7006g00001 248 Coils Coil 119 139 - -
Mupr7006g00001 248 SMART finulus 76 128 IPR011598 GO:0046983
Mupr7006g00001 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 67 139 IPR036638 GO:0046983
Mupr7006g00001 248 FunFam Transcription factor bHLH126 62 150 - -
Mupr7006g00001 248 Pfam Helix-loop-helix DNA-binding domain 71 123 IPR011598 GO:0046983
Mupr7006g00001 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 122 IPR011598 GO:0046983
Mupr7006g00001 248 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 64 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7006g00001 Mupr-Chr7006 20588 22442 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7006g00001 65 231 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 44.571 2.80e-43 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr7006g00001 HLH 7.6e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7006g00001 - - gmx:100780888 375.941