Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr7000g00001 ATGACTTCATTCTCCAGTCTATTATGGTCTGTACCACAGATTATTACAGCCCCTGACGTTGAACTTCGTGCGTGGCGCTTCACTACTGTGTACAAAAGGGCACTTACTTCCCGCCGTTTCAATCACCCAACCGTAGGCACAATCCATTCTCTCTTCACAGAGAGAGAAAGAGAGAGAGAGGGAAACACTGTTTTCACTTTTCATCGTCTAATCGTCTTCGTCTCTCGATCTTTTGAAACCGTGCTTCGATCGGAAACCCTAACTTCCATTCACGTGCGTCAATGGAGCTTCGTTCTCGTCGACGCATCTCCAATCCCACAGTTTCTGCTACACAGTCTTGTGGTTTATCGGCTACGTTTCGGGACGGATCAGGAGCAGCAGCCTAGGGATGATGCTGTTCGGGAGGATGAAACTAATGGCCAGTGCAGTAACAATAAAGATAAAGGTGTTTCTTCTATATCTTCAGATTCAGATACAGTTTCTGGTTCTGATTCAGGTTCCGATTATGAAGATGAAGAGTTGGGTGGGAGCTTACTACCTGACTTGAATGAAGAACCAGCTTCAAGTATTAGTGTTTCTGGTGGAGAAGATTCTGATTCTGATTCATCTGATGGTGGCAAGCCTTCAGCCAAAAGGGAAAAGGCACTGTTGTCCAGAGGGAAAAGAAAATTTTTCAACACAGAAATTGGAGAACCAAGTGATGTGGCTAGAGTGGTGGAGTACAAAGATGATGATAATGAATACTCAATGGTTCAGCAACAATCTGTTCCCTCTGTTCCGAAGGTAACAAAGAAGAGAAAATATACAAGAAAAGCAAGAAATGGAGATACTCGGCCAGTGTTGTTGTGGAATGCATGGGAGGAGGAGCAAGAGAGATGGATTGATAAGAATATATTAGAAGATGTTGATGTAGATGATCAGAGTGAAGTAATGAATGAAACTGCTGAGGCACCCTCTGAGCTGACTATGCCTTTACTTAGATACCAAAATGAATGGTTAGCCTGGGCTTTGAAACAGGAAAATTCTGCTAGTAGAGGGGGAATACTTGCAGATGAAATGGGGATGGGGAAGACTATTCAAGCAATAGCCCTTGTCCTTGCCAAACGTGAATTCCAACAAAGCAGTTGTGAACCAGATCAATCCATACCATGTTCATCCGGACTGTTGCCTGTGATCAAAGGAACACTCGTTATATGCCCTGTGGTTGCTGTCACTCAGTGGGTTAGTGAGATTGATCGCTTTACTTTAAAAGGAAGCACCAAGGTGCTGATTTATCATGGGGCTAATAGATGGAAGAGTGGGGATCGATTTGCGGATTATGATTTTGTGATAACTACATACTCTGTTGTTGAGAGTGAGTACAGGAAGCATATGATGCCTCCTAAAGAGAGATGTCCATATTGTGGTAAATTATTTTTGCCAAGTAAGTTGATTTATCATCAGAACTATTTTTGTGGTCCTGATGCTGTTAGAACAGAAAAACAATCAAAGCAAGCTAAGAAAAAAAATAGAGAGGTTACTAAAGGGAAGACCAAGGAATGTGACAGTAACAAGATGTCAAAGGGTTCTAGGAAGAAAAAGGAAGAGGAAATGTGCACAATTATAGGAGATTCAGAGGCTGTACCTGTACGGACAGATAGGTCAATTTTACATGCTGTACAATGGCAACGGATCATATTGGATGAGGCACACTATATAAAATCTAGACATTGTAACACTGCTAAAGCAGTTCTTGCTTTAGAATCTACCTACAAATGGGCATTAAGTGGCACTCCCCTTCAGAATCGAGTTGGAGAGCTGTACTCTCTGATACGGTTCCTGCAAATAACTCCATATTCCTATTACTTGTGCAAGGACTGTGATTGCAGGATTCTTGATCATAGGTATGATAATTCATTGTATCAATGA 1908 0.4193 MTSFSSLLWSVPQIITAPDVELRAWRFTTVYKRALTSRRFNHPTVGTIHSLFTEREREREGNTVFTFHRLIVFVSRSFETVLRSETLTSIHVRQWSFVLVDASPIPQFLLHSLVVYRLRFGTDQEQQPRDDAVREDETNGQCSNNKDKGVSSISSDSDTVSGSDSGSDYEDEELGGSLLPDLNEEPASSISVSGGEDSDSDSSDGGKPSAKREKALLSRGKRKFFNTEIGEPSDVARVVEYKDDDNEYSMVQQQSVPSVPKVTKKRKYTRKARNGDTRPVLLWNAWEEEQERWIDKNILEDVDVDDQSEVMNETAEAPSELTMPLLRYQNEWLAWALKQENSASRGGILADEMGMGKTIQAIALVLAKREFQQSSCEPDQSIPCSSGLLPVIKGTLVICPVVAVTQWVSEIDRFTLKGSTKVLIYHGANRWKSGDRFADYDFVITTYSVVESEYRKHMMPPKERCPYCGKLFLPSKLIYHQNYFCGPDAVRTEKQSKQAKKKNREVTKGKTKECDSNKMSKGSRKKKEEEMCTIIGDSEAVPVRTDRSILHAVQWQRIILDEAHYIKSRHCNTAKAVLALESTYKWALSGTPLQNRVGELYSLIRFLQITPYSYYLCKDCDCRILDHRYDNSLYQ 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr7000g00001 635 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 338 610 IPR014001 -
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 184 199 - -
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 200 215 - -
Mupr7000g00001 635 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 157 616 - -
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 125 215 - -
Mupr7000g00001 635 Gene3D - 327 464 IPR038718 -
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 125 142 - -
Mupr7000g00001 635 Gene3D - 487 628 IPR038718 -
Mupr7000g00001 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 283 614 IPR027417 -
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 248 270 - -
Mupr7000g00001 635 CDD DEXDc_SHPRH-like 325 632 - -
Mupr7000g00001 635 SMART ultradead3 321 628 IPR014001 -
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 494 523 - -
Mupr7000g00001 635 Pfam SNF2-related domain 339 614 IPR000330 GO:0005524|GO:0140658
Mupr7000g00001 635 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr7000g00001 Mupr-Chr7000 592 3663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr7000g00001 255 627 RAD5 or RAD16-like Gene Family AT1G05120 57.105 1.32e-135 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mupr7000g00001 SNF2_N 5.8e-49 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr7000g00001 K15083 - gmx:100798333 786.178