Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6g00001 ATGAGTTCCAGTTCAGTGACCAAAGCGCCACTCTCTTCCTCTTCATCCACTGAGTCCTTGGATGGTTTGAAGTTTGGCCAGAAAATCTACTTTGAGGATGTGAGTGTTGCAGCTACAACAACAACAACAACTCAAGGGGCCAAAACAAGTGGAGGGGTTTCCTCTTCTTCTTCAAGGAAGGGAAGGGGTGGCTCAGTGCAAGCGGCTCAGCCTCCTAGGTGTCAGGTTGAGGGCTGCAAAGTAGATCTGAGTGGAGCTAAGGCTTACTATTCTAGGCATAAAGTTTGTGCCATGCACTCCAAGTCCCCTACTGTTACTGTAGCTGGTCTCCAGCAAAGGTTTTGCCAACAGTGTAGCAGGTCTCCCTTTGACCTCTCTTTACTTTTGTTTCATCTGCTTACTGAATTTGATCAAGGAAAAAGAAGCTGCCGCAGGCGACTTGCTGGCCATAATGAGCGTCGACGAAAGCCCCCACCCAGCTCCTTGTTAACCTCTCGCCACGCCAGACTTTCTTCACCTATTTTTGATAACGGTGGCCGAGCCAGTGGCTTTCTGATGGAATTTGCTTCATACCCGAGGCTCACATTGAGAAATCCATTGCCAACTCCGAGATCAACTGAGCCGGTTCCAGGGAACCATGGTGCAACGCTTAGCTGGCTCTCCAGCTCAGACACACCATCTGAATTTTTCCTGCAAGGTTCGGGAAGTGGTGGAACAAGCTTCCTTAGTCCCAAACATCCTTTAGTGGAAAGCTACTCTGGAGTCACTGACTCAAACTGTGCTCTCTCTCTTCTGTCAAGTCAAACATGGGGTTCCAGAAACACACAACAAAGTGTTGAGCTGAACAACAACTTGTTGAATTTCAATGAGACATCCATGACACAATTCACGGCGGCATCTTCTCAAGTTGCCGCCGCCCATCAACTTCCAAATGCCCCTTCATGGTACTTGAAGGGTGGCGATTCTGGCAATTGCTCGCCGGAGGGTGTCCCAGATCTCGGTCTGGGTCAAATTTCGCCGCCTCTTCATAGCCATCTTCATGGTGAGTATGATGTGTCACTGCAGGGCAGGAGGCATTACATGGATATAGGAGAGTCCAGGGCCTGTGAGTCTTCTCAC 1119 0.4951 MSSSSVTKAPLSSSSSTESLDGLKFGQKIYFEDVSVAATTTTTTQGAKTSGGVSSSSSRKGRGGSVQAAQPPRCQVEGCKVDLSGAKAYYSRHKVCAMHSKSPTVTVAGLQQRFCQQCSRSPFDLSLLLFHLLTEFDQGKRSCRRRLAGHNERRRKPPPSSLLTSRHARLSSPIFDNGGRASGFLMEFASYPRLTLRNPLPTPRSTEPVPGNHGATLSWLSSSDTPSEFFLQGSGSGGTSFLSPKHPLVESYSGVTDSNCALSLLSSQTWGSRNTQQSVELNNNLLNFNETSMTQFTAASSQVAAAHQLPNAPSWYLKGGDSGNCSPEGVPDLGLGQISPPLHSHLHGEYDVSLQGRRHYMDIGESRACESSH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6g00001 373 SUPERFAMILY SBT domain 72 162 IPR036893 GO:0003677|GO:0005634
Mupr6g00001 373 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 24 345 IPR044817 GO:0003677
Mupr6g00001 373 MobiDBLite consensus disorder prediction 1 20 - -
Mupr6g00001 373 MobiDBLite consensus disorder prediction 41 71 - -
Mupr6g00001 373 MobiDBLite consensus disorder prediction 146 168 - -
Mupr6g00001 373 MobiDBLite consensus disorder prediction 41 64 - -
Mupr6g00001 373 Gene3D - 64 144 IPR036893 GO:0003677|GO:0005634
Mupr6g00001 373 ProSiteProfiles Zinc finger SBP-type profile. 71 157 IPR004333 GO:0003677
Mupr6g00001 373 Pfam SBP domain 74 156 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6g00001 Mupr-Chr6 9602 14005 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6g00001 23 372 SBP-box Gene Family AT2G42200 41.379 7.80e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr6g00001 SBP 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6g00001 - - gmx:100789301 531.561