Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6997g00004 ATGTCTTTAGCAGATTTTATCGTTGTTTACGCTCACCAAGGAATATTCCCCGTAGCGGCGCTGTCTCTTTGGCGCCGCTACACATTTCCATTTTCCCCGCCAGAGCAACGAGTTTTGTGTTTCTCGAATCCATCCATGGATAGTAATAACTCCGGGTCTGTTGTTCCCTATGGTACTGACCCATTTGATAGTCCACTTCTCCAACACTTTCTCCAAGAGGACCCTGCATTTGTCTATGCATTCAACGATGCACTGCCCCAACAACAACAACAAAACGATCCTTTTGGCCTTCTACAGGGTAATAATGTTTCCTTATCAAATTTAGTGATCCAAGATCAACCTATGTTGGGCAATAATAATTTTCCCATTGGAGGAGGACTTGGTAACTTTGAACCGTCTCCATTCATTATGAAGGGTAAGGAACCCTTCTTCCAAGGTCAATTCCCGCATGCCAATAATAATATTTTCAACGGAAGAGTTGGTAACTTTGAACCGGCTCCACCGAGGCATCAGAATCAAAGTCTGGCTCCCCAAAAGTTCCCAGATGTGGTCACACTTCTCGATTGGCCCCTCTCACCAAAACCATTCTTTTGCAGTTGCTGTCAAGTTCTTAGACAAATAGTTCACACTAATGGTGCTCAGTTTGAGAAGCTTGAGATTCATGGATCGATCGGGGTGTTTAACCATGCAATAATCGAGATTCAGAATATCACACAGGATGTTCCTTCAAATAATGGTTATCAAATGATTGATCTGTGCAACAAAAGCGCAGCAGAAATTAAGAAGTTCATAGAAGGATACTGCGACCAACAGAATCAATTTGGATACATTATTATGGAAGATCCGTTGTCTGCGTATTATGAGGCCATCTCCGTTGGAATGGGTTGGACCGACGAACTCAGTGACGAAGACGATGATATGATCCCACTCGCTATGTTCGTAGAAAATGACACGGAGCAAGATCCCGAGCCCGAGCCCGAGCCCGAGAATGGATCGAGTTCAACTTCTAAACCTAATTTGTCAGATCAGGTTATAGTTTTTGTTTTCTTAACAAGTGCTGCGTTTGCATCACGTGTGTATGTTTCATCAGTCTTTTGTTTTCAATTTTGTTGCATTGCACAGAGGAAGAGAATACCAAATATGACATTGAATGATTTGAGCGGTGTGTTACATATACCTATTAAGGCTGCAGCTAAAGAACTGGGAGTATGCCCCACTGTCGTGAAGAAAATCTGCCGCAAGTCAGACTTAAAAAGATGGCCCCAAAGAAAGGTTAACAGCATTGTGAAGCGGGTGGCAGTACTGAGAAAAGCATTGGATTCACCAGATCCAGGGATATGGACAAGAACTCGAAAGGAAATTGAAAGACTTCAACAATTGTGGTGGAATTGCCCCAACTGGAATAGAAATGCTCCTATTCCAAGGATAGTGGACCTCAAGTGTTTCGGTGGAAATGACTCATCTGTCTTTGCTTTGATGAAAATTTCACAATCTTTGGCAAAAGTGAAAGAAGATACCGCTATCTTTGCCAGTTCATTAAGTGATTATTGA 1551 0.4249 MSLADFIVVYAHQGIFPVAALSLWRRYTFPFSPPEQRVLCFSNPSMDSNNSGSVVPYGTDPFDSPLLQHFLQEDPAFVYAFNDALPQQQQQNDPFGLLQGNNVSLSNLVIQDQPMLGNNNFPIGGGLGNFEPSPFIMKGKEPFFQGQFPHANNNIFNGRVGNFEPAPPRHQNQSLAPQKFPDVVTLLDWPLSPKPFFCSCCQVLRQIVHTNGAQFEKLEIHGSIGVFNHAIIEIQNITQDVPSNNGYQMIDLCNKSAAEIKKFIEGYCDQQNQFGYIIMEDPLSAYYEAISVGMGWTDELSDEDDDMIPLAMFVENDTEQDPEPEPEPENGSSSTSKPNLSDQVIVFVFLTSAAFASRVYVSSVFCFQFCCIAQRKRIPNMTLNDLSGVLHIPIKAAAKELGVCPTVVKKICRKSDLKRWPQRKVNSIVKRVAVLRKALDSPDPGIWTRTRKEIERLQQLWWNCPNWNRNAPIPRIVDLKCFGGNDSSVFALMKISQSLAKVKEDTAIFASSLSDY 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6997g00004 516 Pfam RWP-RK domain 380 428 IPR003035 -
Mupr6997g00004 516 MobiDBLite consensus disorder prediction 317 337 - -
Mupr6997g00004 516 PANTHER PROTEIN RKD4 40 435 IPR044607 GO:0003700
Mupr6997g00004 516 ProSiteProfiles RWP-RK domain profile. 368 449 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6997g00004 Mupr-Chr6997 42151 45322 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6997g00004 380 441 NLP Transcription Factor Family AT3G59580 43.548 1.20e-10 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mupr6997g00004 RWP-RK 2.3e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6997g00004 - - ccaj:109790026 306.99