Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6993g00001 ATGGAGGCTGAGTTTGGGGGGAATAAGCAGTACTTGTATGGACCTGTGGTGTCAGGAATGAAAAAAGCTGTTGGGAATGGGAAGGGGAGTTTGGAGTGGGATTTGAATGATTGGAAATGGGATGGTGATCTTTTCATTGCTCAACCACTTAATTCAGTGCCATCAGATTGTAGGAGTCGCCAGTTTTTCCCACCTCATCCTGCGATTCCTGCAAAAAGTGCTAATCCTTCTACCAATTTGTCTTTTTCTACATTCAACTCAGGTGAAGGAAAGAGAGAATTGGAGAAAAGGAGGAGGGTTGTTGTAGGTGAAGGTGAAGGGGAGGGGCTGAATGATGAGGGTGGTTCTCTTAATTTGAACCTTGGGGGTCATGGTGACACTCTCATGGTGGAAGGAGAGGAAAAAAGTGGAAAGAAGACAAAGGTAATTGGCACTACTACTACCTCTAACCGTGCTGTTTGTCAGGTGCAAGATTGTAGGGCTGATCTTAGTAATGCCAAGGATTACCACCGTCGCCACAAGGTTTGTGATGTTCATTCTAAGGCCACTATGGCACTAGTGGGAAATGTTATGCAACGTTTCTGTCAACAGTGTAGCAGGTTTCATGTTCTTCAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGTCGGCGTCTCGCAGGTCACAATAGGAGGAGGAGGAAAACTCATCCTGATGTTAGTGTTGTTAATGAAGGCTCACTGAACGATGAAAGGGGCAGTAGCTATCTGTTGATGACAAATGGCTCAGATCATGCAAGGAACCATGATATTCTCTCTCATCTGCTGAGGAACCTGGCGAGTCTGGCTGGTCCAAATAATGGTAGAAGTGTAGCCTCCTTATTGGAGGAATCTAAAGGTTTGGAAAATGCTGGGACACCTGGAGTTTCTCATGATAAACCCAACCTTAATTCAAATGGTCCTGAAGCTTCCAGGCCTTCTGGTTTTTCCATCAAGACAAATAATGGCATCATCAATCTGGAACCTCCAGTGTCTGTGGCACAGTGTGAACCAGTGTCTACTAATGGTAGGACACCTTTAGGTAATGGTGGAATAACAAATTTAAAACCTCCTTCAGGACCACTGCTCTCAAGTGTAAGTCAATCAAGGGACAGCCTTCCATCCCAATTAACTGCAGTGAAGACTACTACAGTTGGAAGGGACAACTTAAATAACATTGACCTGAATAATGTATACAATGATATACATAATACTGTTGAGAATCCTAAGAAGCCTTATCCTCCTGTGGCTTCAGAGATGGTGTCTATTGACCATCCTTCACAGTTGCATTGTGATTCTCTCAAATCAACACAGACAAGTGGAAACTCAGATTCAACCTCTACCCAATCACCATCTAGTTCCAGTGGAGAAGCCCAGAGTCGCACAGATCGAATTGTTTTTAAACTCTTTGGTAAGGATCCAAATGATTTTCCCCTTCTTCTCCGATCACAGATTCTCAATTGGTTATCCCGCAGTCCCACAGAGATAGAGAGCTATATAAGGCCAGGTTGTATCATATTAACGATATATCTCCATCTTGAAAAATCTGCATGGGAGGAGCTCTACTGTAATCTAGGATCCAGCTTGAGAAAGCTTCTTGCTGCATCAAATGATTCATTTTGGAGAACAGGATGGGTATATGCAAGGGTGCAGCACTCTGTAGCTTTTCTGTATAACGGTCAGGTAGTCTTAGATGTGCCCTTGCGTCTCAAAAGCCCACAACATTGTAGGATTTCATGCATTAAACCACTTGCCGTTCCTGCAAGTGCTAGTGCTCAATTTGTTGTGAAAGGTTTCAACCTTTCCCAGTCTAGCACAAGGTTGCTCTGTGCACTTGAAGGGAAGTATCTGGTAAATGATAGTTGTCATGATTTGATTGATGAAGATGATGCACCCATTCAGCATCTCAGCTTCTCTTGTCATATACCAAATTTAACTGGGAGGGGGTTTATTCAGGTGGAAGACCATGGTCTTAGCAGCTGTTCCTTTCCTTTTATAGTTGCAGAGCAAGAAGTATGTTCAGAGATCTGCAAGCTGGAGAATGTGATCGAGGCATCCGAAACCACTGATGACATCCAGACAAAAAACCAACAGATGGAAGAAAAAACTCGAGCTTTGGATTTCTTACAAGAAATGGGTTGGCTCCTTCATAGAAGTCATGTGAAAGTTAGGCTAGGGCCCTTTGCTCCTATCCACGATCTCTTCCAATTCAATCGGTTCATGTGGCTTGTTGACTTCTCCATGGACCATGGTTGGTGTGCTGTGATGAAAAAACTCTTGGACATTATATTTGAGGGTGGTGTTGATGCAGGAGAGCATGCCTCCATTGAGCTTGCATTGTTAAACATGGGTCTTCTACACAGAGCTGTAAAGAGAAACTGTAGGCCTATGGTAGAACTACTGTTAAGATTTGTGCAAGTTAAAACCTCAGATGGTGCAGACAGTGAAGTGAAGCAAGTTGACAAGGCCCTTGACAGATTCTTATTTAGACCTGATACTATTGGGCAAGCAGGGTTGACTCCTCTTCATGTTGCAGCAAGCATGAGTGGCTCGGAGAACGTGTTGGATGCGTTAACTGATGATCCAGGAATGGTAGGAATTGAGGCATGGAAAAGTGCCCGGGACAGTACAGGTTTGACCCCCTACGACTATGCATGCCTTGGGGGCTATCACTCCTACATTCAACTAGTCCAGAAGAAGACCAACAAAAAAGGTGAAAGACAACTTGTGGTTGATATCCCTGGCACTGTTGTAGATAATAGCACAAAGCAGAAGCAATCAAATGGACATGGGACATGCAAAGTTTTGGGTTTACAAACTGAGAAGATTGAAACCACAGCAGTGCCACGTCGATGTGGGATATGCCAGCACAAGGTGGCTTATGGTGGCATGAGAACAGCAATGGTTTATAGGCCAGTCATGCTCTCCATGGTGACCATAGCAGCTGTGTGCGTGTGTGTAGCTTTGCTCTTCAAAAGCTCACCTAGAGTTTCTTATGTGTTTCAGCCCTTTAACTGGGAATCATTGGAGTATGGGGCAATTTAA 3060 0.4402 MEAEFGGNKQYLYGPVVSGMKKAVGNGKGSLEWDLNDWKWDGDLFIAQPLNSVPSDCRSRQFFPPHPAIPAKSANPSTNLSFSTFNSGEGKRELEKRRRVVVGEGEGEGLNDEGGSLNLNLGGHGDTLMVEGEEKSGKKTKVIGTTTTSNRAVCQVQDCRADLSNAKDYHRRHKVCDVHSKATMALVGNVMQRFCQQCSRFHVLQEFDEGKRSCRRRLAGHNRRRRKTHPDVSVVNEGSLNDERGSSYLLMTNGSDHARNHDILSHLLRNLASLAGPNNGRSVASLLEESKGLENAGTPGVSHDKPNLNSNGPEASRPSGFSIKTNNGIINLEPPVSVAQCEPVSTNGRTPLGNGGITNLKPPSGPLLSSVSQSRDSLPSQLTAVKTTTVGRDNLNNIDLNNVYNDIHNTVENPKKPYPPVASEMVSIDHPSQLHCDSLKSTQTSGNSDSTSTQSPSSSSGEAQSRTDRIVFKLFGKDPNDFPLLLRSQILNWLSRSPTEIESYIRPGCIILTIYLHLEKSAWEELYCNLGSSLRKLLAASNDSFWRTGWVYARVQHSVAFLYNGQVVLDVPLRLKSPQHCRISCIKPLAVPASASAQFVVKGFNLSQSSTRLLCALEGKYLVNDSCHDLIDEDDAPIQHLSFSCHIPNLTGRGFIQVEDHGLSSCSFPFIVAEQEVCSEICKLENVIEASETTDDIQTKNQQMEEKTRALDFLQEMGWLLHRSHVKVRLGPFAPIHDLFQFNRFMWLVDFSMDHGWCAVMKKLLDIIFEGGVDAGEHASIELALLNMGLLHRAVKRNCRPMVELLLRFVQVKTSDGADSEVKQVDKALDRFLFRPDTIGQAGLTPLHVAASMSGSENVLDALTDDPGMVGIEAWKSARDSTGLTPYDYACLGGYHSYIQLVQKKTNKKGERQLVVDIPGTVVDNSTKQKQSNGHGTCKVLGLQTEKIETTAVPRRCGICQHKVAYGGMRTAMVYRPVMLSMVTIAAVCVCVALLFKSSPRVSYVFQPFNWESLEYGAI 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6993g00001 1019 MobiDBLite consensus disorder prediction 436 465 - -
Mupr6993g00001 1019 MobiDBLite consensus disorder prediction 218 239 - -
Mupr6993g00001 1019 SUPERFAMILY SBT domain 152 233 IPR036893 GO:0003677|GO:0005634
Mupr6993g00001 1019 ProSiteProfiles Zinc finger SBP-type profile. 151 228 IPR004333 GO:0003677
Mupr6993g00001 1019 MobiDBLite consensus disorder prediction 293 321 - -
Mupr6993g00001 1019 Gene3D - 772 919 IPR036770 -
Mupr6993g00001 1019 FunFam Squamosa promoter-binding-like protein 14 145 215 - -
Mupr6993g00001 1019 MobiDBLite consensus disorder prediction 349 376 - -
Mupr6993g00001 1019 Pfam SBP domain 154 227 IPR004333 GO:0003677
Mupr6993g00001 1019 Coils Coil 697 717 - -
Mupr6993g00001 1019 SUPERFAMILY Ankyrin repeat 785 904 IPR036770 -
Mupr6993g00001 1019 Gene3D - 144 215 IPR036893 GO:0003677|GO:0005634
Mupr6993g00001 1019 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 71 901 IPR044817 GO:0003677
Mupr6993g00001 1019 MobiDBLite consensus disorder prediction 302 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6993g00001 Mupr-Chr6993 7214 13577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6993g00001 26 1018 SBP-box Gene Family AT3G60030 44.752 0.0 733
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mupr6993g00001 SBP 8.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6993g00001 - - gsj:114419913 1629.77