Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6973g00001 ATGTCTGCAGAAGAAGTAGTTGTTCATCTCCAATTAAAAAAGAAGAAGAAAGCTACAAGAATGGAACTTTCGAGCCAAGAAGGAGAAATACCGATTCCAATCCCAATCCAAATACCAAGTTATGGACATGGACATGGACATGGGAATGGACACGGAGTGATGATAGAGCAGGAGCAAAACAACACAAATGGGATGCAGGAGGGAGGAGGATACAGGAAAGTGGTTAGGTACAGAGAATGCCTGAAGAACCATGCAGCAGCCATGGGAGGGAATGCAACAGACGGGTGTGGAGAGTTCATGCCAAGTGGAGAAGAGGGAAGCATTGAAGCACTAAACTGCTCAGCCTGTCATTGCCATAGAAACTTCCACAGAAAAGAAACAGAAGCTGATATTCTCCTCCGAAGGAGACTTGTTCATAAGAACCTCCTCTCACCCGATGCACTTGGCTACCCCCTTCCTTCTAGAACTGTTCCTCCTCCTCTTCCTCCTCATCATATGATCCTTCCCTACAACATTTCCCACCTCCCTTCTGAGTCTGATGATCAAGAAGATGCTGCTATTCTTCATCACCCTCGACCCTCCCAGCTTGTCAAGAAACGCTTCAGGACCAAGTTCAGTCAGGAGCAGAAGGACAAAATGCTCAACTTTGCTCACAAGGTTGGCTGGAAGATTCAGAAGCAAGAGGAATCTGTGGTGCAACAGTTCTGCCAAGAGATTGGTGTCAAGAGACGAGTTCTCAAGGTTTGGATGCATAACAATAAGCACAATCTCTCCAAAAAGAACCCCCCACCTAGTACTCCTCCACCACCTTAA 813 0.4649 MSAEEVVVHLQLKKKKKATRMELSSQEGEIPIPIPIQIPSYGHGHGHGNGHGVMIEQEQNNTNGMQEGGGYRKVVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGSIEALNCSACHCHRNFHRKETEADILLRRRLVHKNLLSPDALGYPLPSRTVPPPLPPHHMILPYNISHLPSESDDQEDAAILHHPRPSQLVKKRFRTKFSQEQKDKMLNFAHKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLSKKNPPPSTPPPP 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6973g00001 270 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 76 126 IPR006456 -
Mupr6973g00001 270 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 62 257 - -
Mupr6973g00001 270 FunFam Zinc-finger homeodomain protein 2 188 259 - -
Mupr6973g00001 270 NCBIfam homeobox domain, ZF-HD class 198 254 IPR006455 -
Mupr6973g00001 270 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 77 126 IPR006456 -
Mupr6973g00001 270 Pfam ZF-HD protein dimerisation region 75 127 IPR006456 -
Mupr6973g00001 270 Gene3D - 189 260 - -
Mupr6973g00001 270 SUPERFAMILY Homeodomain-like 192 259 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6973g00001 Mupr-Chr6973 19446 20545 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6973g00001 31 261 ZF-HD Transcription Factor Family AT1G14440 50.397 3.10e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr6973g00001 ZF-HD_dimer 2.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6973g00001 - - qsa:O6P43_031434 319.316