Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6956g00004 ATGGCGACCAAAGATTCACCTCTCGAGCTTCACGAAATAACCACCGATTCTGAAGGATCCGACTGGAACGATTCGGAGGAAGACCCCGACTATGACGCGCTCGAAGAAACTCATAGCAACTTCTCAAACCTCTCACTTAAGCACAAGGCAAAAGCGCGCGTTGTCGAAGATAAGGGTATAGGTGAGCAAGTGTTGGAGGTGACTGCATCTGTTCAAGATGGGGAGAATTTTGATAAAGTTCAAAAACTAATCGAAGAGGGACTGGTAGAGAAATTGAAAGTGAATGAGTGCAAGTTGTATTTGAGGAAGAATGGTCTGAGGCTAACTGGAAACAAGGACACGCTAATACAACGCATAAAGGAGCATTTAGAGATTTTAAATGGAGGGGAGAAAAAGTATCCACCTTCTAGCTTTGTGTTGAATTGTAAAGGTGATGCATGCGCTGGTGATGTTGTTTTATTTGAGCAAAATGTCTATGAAATGTTTAACATAGCATCCAGGAGTGCCAGTGGTCCACCTTGTGGCAAAAGGATTGTTGCAGGTCGTATAGTGAAAGAAAGTTATGGTGCTGCTAAACAACAGCATACATTTACGATTGAAGTACTCTGGAGCAAAGGAGAAAAGCCTCTCCCACCCCTTTATCCCCTACTGATCAAGGGTCGAAACCTTTACAAGTTGAAGACTTTGAGACAGAAATGGGAGGATGAAGCAAAACGGCAGAAAATATTGATGGAAAAACACTCAAGGGGAACTGTTGCTAGGGCAGATAGAGAAGTAAGGATACAAGAAAAGGAGAAGAGGAAAAATATTATGAAAAATAGGGTCTCTATAAAGCATTCAGCAAAGAACCAAAGTCAACCACATTCACACGTTACAAGGCCACCATATCAACCTCAAGAAATAAATGTAGCCATTAATCCAGAAAAGCCAGTATTCTCATCTCGAAATTCAGGTTTAACTGCCGATATAAGGAAAGAAACATCCTTTATTAGAAATAACCCAGCAGCTGTAACCGGACAATTTCACAATATGCATAATCAGCAAGCTTGGAACCTCACAGCTGACTGTAGGAGTACTTTTGATATGAGGGGAGCTGAACTTGGTGCATACTACAATTATGCTGATCCCCACTTCAGAGAAAAACCAACTACTATTGAGAAATGTCACCCTCTCATTGCTGAGACAACTGGATTTACAGGGTGGACTCATCATAGGATGCCTTTGGCAAATGCAAACCACTCTTACCCGTTGATTCCCAACACACAAAGCTATAAGCCAAATCAGCTCTGTAGACATTATTCCCGTGGGAGGTGCTATTTTGGCGACAACTGCAAATTCTTACATGATTGGAGAGACAAGGGGAATGCATGA 1371 0.4201 MATKDSPLELHEITTDSEGSDWNDSEEDPDYDALEETHSNFSNLSLKHKAKARVVEDKGIGEQVLEVTASVQDGENFDKVQKLIEEGLVEKLKVNECKLYLRKNGLRLTGNKDTLIQRIKEHLEILNGGEKKYPPSSFVLNCKGDACAGDVVLFEQNVYEMFNIASRSASGPPCGKRIVAGRIVKESYGAAKQQHTFTIEVLWSKGEKPLPPLYPLLIKGRNLYKLKTLRQKWEDEAKRQKILMEKHSRGTVARADREVRIQEKEKRKNIMKNRVSIKHSAKNQSQPHSHVTRPPYQPQEINVAINPEKPVFSSRNSGLTADIRKETSFIRNNPAAVTGQFHNMHNQQAWNLTADCRSTFDMRGAELGAYYNYADPHFREKPTTIEKCHPLIAETTGFTGWTHHRMPLANANHSYPLIPNTQSYKPNQLCRHYSRGRCYFGDNCKFLHDWRDKGNA 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6956g00004 456 Pfam CCCH-type zinc finger 429 449 IPR041367 -
Mupr6956g00004 456 Gene3D SAP domain 77 135 IPR036361 -
Mupr6956g00004 456 Gene3D - 419 455 - -
Mupr6956g00004 456 ProSiteProfiles Zinc finger C3H1-type profile. 424 451 IPR000571 GO:0046872
Mupr6956g00004 456 SMART sap_9 89 123 IPR003034 -
Mupr6956g00004 456 SUPERFAMILY SAP domain 79 124 IPR036361 -
Mupr6956g00004 456 ProSiteProfiles SAP motif profile. 89 123 IPR003034 -
Mupr6956g00004 456 PANTHER SAP DOMAIN-CONTAINING PROTEIN 15 321 - -
Mupr6956g00004 456 MobiDBLite consensus disorder prediction 1 30 - -
Mupr6956g00004 456 Pfam SAP domain 90 123 IPR003034 -
Mupr6956g00004 456 SMART c3hfinal6 425 450 IPR000571 GO:0046872
Mupr6956g00004 456 SUPERFAMILY CCCH zinc finger 425 449 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6956g00004 Mupr-Chr6956 28245 31386 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr6956g00004 SAP 1.2e-09 CL0306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6956g00004 - - gmx:100815642 691.034