Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6953g00005 ATGTATTCTAGTAATGCAGCAAGCAGCAGCAGAGCCTCTTCTGGGACTGGTCGCTACCGCGGAGTAAGGCGTAGGAGCAGCGGAAAATGGGTCTCTGAAATCCGCGAACCTAGAAAGCCTAACCGGATTTGGTTAGGAACATTCCCCACCCCAGAAATGGCCGCGGTGGCCTATGACGTGGCAGCGTTTGCACTCAAGGGTAAGGATGCTGAGCTCAACTTTCCTGATTCCGCTTCATCGCTTCCTGTACCTGCTTCTCTCTCTGCGCGTGACATTCAAGTGGCTGCGGCGGCGGCGGCCGCCGCTGCTGGAGCAGCCAAGGATGCCATGCAAACGCAAACTGGGAATTATAATTTTTCAGAGGCGCAAGAGAACTACACAGGGATGAGCAACCAGTTTGTGGATGAGGATTTGATCTTTGACATGCCGAATGTTCTGGTCAATATGGCTCAAGGAATGCTGCTTAGTCCTCCTCCTTTTGACATTGGTGGGGAACCTTATAGCCCAGAAAACACGGAACAAGAGACAAGCCTGTGGAATTTTCCTTAA 549 0.5173 MYSSNAASSSRASSGTGRYRGVRRRSSGKWVSEIREPRKPNRIWLGTFPTPEMAAVAYDVAAFALKGKDAELNFPDSASSLPVPASLSARDIQVAAAAAAAAAGAAKDAMQTQTGNYNFSEAQENYTGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGGEPYSPENTEQETSLWNFP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6953g00005 182 Gene3D AP2/ERF domain 17 76 IPR036955 GO:0003700|GO:0006355
Mupr6953g00005 182 FunFam Ethylene-responsive transcription factor 2 18 76 - -
Mupr6953g00005 182 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Mupr6953g00005 182 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 18 180 IPR045277 GO:0003700
Mupr6953g00005 182 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Mupr6953g00005 182 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Mupr6953g00005 182 ProSiteProfiles AP2/ERF domain profile. 18 75 IPR001471 GO:0003700|GO:0006355
Mupr6953g00005 182 MobiDBLite consensus disorder prediction 1 32 - -
Mupr6953g00005 182 MobiDBLite consensus disorder prediction 1 16 - -
Mupr6953g00005 182 Pfam AP2 domain 18 67 IPR001471 GO:0003700|GO:0006355
Mupr6953g00005 182 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Mupr6953g00005 182 PRINTS Ethylene responsive element binding protein signature 57 77 IPR001471 GO:0003700|GO:0006355
Mupr6953g00005 182 MobiDBLite consensus disorder prediction 160 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6953g00005 Mupr-Chr6953 27603 28599 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6953g00005 19 182 AP2-EREBP Transcription Factor Family AT2G36450 61.404 3.98e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr6953g00005 AP2 3.7e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6953g00005 - - gmx:100782443 293.123