Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6948g00001 ATGGGAGTTCCAGACAGAGACCCTCTTTCCCAATTGAGTTTGCCTCCTGGCTTTCGGTTTTACCCCACCGACGAGGAGCTTCTCGTTCAGTATCTATGCCGCAAGGTCGCTGGCCACCATTTCTCTCTGCAAATCATCGCCGAAATTGACTTGTACAAGTTCGACCCGTGGGTTCTTCCAAGCAAGGCCATTTTCGGCGAGAAGGAATGGTACTTTTTCAGTCCCAGAGACAGGAAATACCCAAACGGGTCGCGACCCAATAGAGTAGCCGGATCCGGGTACTGGAAGGCAACTGGAACCGACAAGATAATCACTAGTGAAGGTAGAAAAGTTGGCATAAAAAAAGCCCTCGTTTTCTACGTTGGCAAAGCTCCCAAAGGCACAAAAACCAATTGGATCATGCACGAGTATCGCCTCCTCGATTCTTCCAGAAAGAACACCGGCGCCAAGCTTGACGATTGGGTTCTGTGTCGTATATACAAGAAGAACTCGAGTGCGCAGAAAGCCGTGCCAAACGGCGTCGTTTCGAGCAGGGAACACACTCAATACAGCAACGGTTCTTCATCTTCGTCTTCGTCCCACCTGGATGACGTTCTGGAATCTCTACCAGAGATCGACGAACGATGCTTCGCGGTGCCACGTGTCAGCTCGCTGCAGCAACAGCACGAGGAGAAGCTGAATGTTCAGAGCCTCGGCGCAGGGGGTTTGGTGGAATGGGGCAACCCTGCGGTTCTGGAGTCGGTGGCTGATTTCGTCTCGGGGAATCAAGTGGTGCAGGCCCAAACTCAGGGGATGGTGAATTACGGTGGGTGTAATGACCTTTATGTCCCCACGCTGTGCCACGTGGACTCATCGGTTCCGCTAAAGGTGGAAGAAGAGGTGCAAAGCGGCGTGAGAAACCAACCTTGGTTTGTTCAGAATGATTTCGCACAGGGGTTTCAAAACTCGATGGACACGTGTGGGTTTAAGTACCCGGTTCAGCCGGTCGGGTTTGGGTTCAGGCAATGA 1008 0.5228 MGVPDRDPLSQLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITSEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKNTGAKLDDWVLCRIYKKNSSAQKAVPNGVVSSREHTQYSNGSSSSSSSHLDDVLESLPEIDERCFAVPRVSSLQQQHEEKLNVQSLGAGGLVEWGNPAVLESVADFVSGNQVVQAQTQGMVNYGGCNDLYVPTLCHVDSSVPLKVEEEVQSGVRNQPWFVQNDFAQGFQNSMDTCGFKYPVQPVGFGFRQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6948g00001 335 FunFam NAC domain-containing protein 72-like 23 167 - -
Mupr6948g00001 335 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Mupr6948g00001 335 MobiDBLite consensus disorder prediction 170 197 - -
Mupr6948g00001 335 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Mupr6948g00001 335 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 214 - -
Mupr6948g00001 335 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Mupr6948g00001 335 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6948g00001 Mupr-Chr6948 7832 9423 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6948g00001 1 274 NAC Transcription Factor Family AT3G15500 61.724 6.55e-120 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr6948g00001 NAM 6.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6948g00001 - - gmx:100170718 607.06