Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6941g00001 ATGGTGTACATTGCGATTCGCTTGCAGAGATACTTTTTTGCTTCTGCTAAAGAAGTGATGCGGATGAATGGCACAACAAAATCCTTTGTAGCTAATCATGTTGCCGAAACTGTTGCTGGAGTTGTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTCTTCAAGAAGAATCTTGATCTAATTGATATCAATGCTAGTGCTTTCTTCCATAGTTTCTCTTCAAATGAGTGGTTGATCCTACGATTAGAAATGGTGTCTGCAGTAGTTCTTGCCTTTGCAGCACTTTGCATGGTTATGCTTCCACCTGGAACTTTCGCCCCTGGATTTATTGGCCTGGCTCTCTCTTATGGCTTTTCACTAAACGCTGCCTTGGTATTTTCAATTCAAAGTCAATGCAGTCTAGCAAATTATATAATATCTGTAGAAAGGATAAATAAATATATGCATATACCTAGTGAGGCTGAAGAAGTAATAGAAGGAAATCGTCCTCCTTTGAATTGGCCAGTTGCAGGCAAAGTAGAGATACATGATCTCCAGATAAGATATAGGCCTGAAGGACCACTTGTGCTCCATGGTATCACTTGCACATTTGAAGGAGGGCACAAGATTGGTATTGTTGGCAGGACAGGCAGTGGGAAGTCCACTCTTATAGGTGCTTTATTTCGCCTTGTGGAGCCGGCAAGTGGAGAAGTTGTAGTTAATGGCATAGACATCTCTTCTATTGGCCTTCATGACTTGAGGTCACGTTTTTGTATTATAGCACAAGATCCTACCCTTTTCAATGAGACAGTTAGATATAATTTGGACCCTTTATCTCAACATTCTGATCAAGAGATATGGGAGGTTCTTGGTAAGTGTCAATTGCGAGAAGTGGTTCAAAAGAAAGAAGAGGGCTTAAACTCCTCAGTTGTTGGAGAGGGATCAAACTGGAGCATGGGACAAAGGCAGCTATTCTGTTTGGGGCGTGCTCTTTTGAGGAGAAGCAAAATATTGGTGTTGGATGAAGCAACAGCATCAATTGATAATGCAACTGATTTGATTCTGCAAAAAACCATTAGGACTGAGTTTGCATATTGTACAGTGATCACAGTAGCACACAGGATACCAACCGTGATGGATTGCACTATGGCTCTTTCAATCAGTGAAGGAAATTTGGTGGAATATGATGAACCAATGAGCTTGATGAAGACAGAAGGATCACTATTCAGGCAGCTTGTCAATGAATACTACTCTCATTTTCAATCT 1245 0.4096 MVYIAIRLQRYFFASAKEVMRMNGTTKSFVANHVAETVAGVVTIRAFEEEDRFFKKNLDLIDINASAFFHSFSSNEWLILRLEMVSAVVLAFAALCMVMLPPGTFAPGFIGLALSYGFSLNAALVFSIQSQCSLANYIISVERINKYMHIPSEAEEVIEGNRPPLNWPVAGKVEIHDLQIRYRPEGPLVLHGITCTFEGGHKIGIVGRTGSGKSTLIGALFRLVEPASGEVVVNGIDISSIGLHDLRSRFCIIAQDPTLFNETVRYNLDPLSQHSDQEIWEVLGKCQLREVVQKKEEGLNSSVVGEGSNWSMGQRQLFCLGRALLRRSKILVLDEATASIDNATDLILQKTIRTEFAYCTVITVAHRIPTVMDCTMALSISEGNLVEYDEPMSLMKTEGSLFRQLVNEYYSHFQS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6941g00001 415 SUPERFAMILY ABC transporter transmembrane region 2 153 IPR036640 GO:0005524|GO:0016020
Mupr6941g00001 415 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 407 - -
Mupr6941g00001 415 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 406 IPR027417 -
Mupr6941g00001 415 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr6941g00001 415 Gene3D ABC transporter type 1, transmembrane domain 1 155 IPR036640 GO:0005524|GO:0016020
Mupr6941g00001 415 SMART AAA_5 199 382 IPR003593 GO:0016887
Mupr6941g00001 415 FunFam ABC transporter C family member 3 156 408 - -
Mupr6941g00001 415 CDD ABCC_MRP_domain2 171 391 - -
Mupr6941g00001 415 Gene3D - 157 409 IPR027417 -
Mupr6941g00001 415 Pfam ABC transporter transmembrane region 2 96 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mupr6941g00001 415 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 173 407 IPR003439 GO:0005524
Mupr6941g00001 415 Pfam ABC transporter 190 338 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6941g00001 Mupr-Chr6941 4 2333 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6941g00001 158 414 Calmodulin-binding Proteins AT2G36910 27.925 3.51e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6941g00001 K05666 - gmx:100786761 751.51