Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6938g00001 ATGGCCATGCAAACTGTTTATCTGAAAGAACATGAAGGAATTGTCCACAATTCCGTTGGACAGTTGTCGTCAGTAACTTCAGCTCCGTGGTGGAGTGCCTTTGGATCTCAACCAGTTTATGGGGAGTATTGTGGCCAAATGAAACCCTTTTCCTTGGAGATTTCAAACTATGTTGACCAATTTGGTGCTGGTAAGCAAGCGGTACGAGGAGTTGAACAATTGTTGGATAAAGGACATACAACCCAGTTTACCATCGTTCCAGATGATTATAAAATGTCAGGTGATGCACAAAATCCTCAGGCAACCTTATCACTGCAGTCATCACTTGCTGAGCCCCACAATCGTTTTGAGATAGGGTTTAATCAGCCTATGATCTGTGCAAAATATCCTTATATGGATCAATTTTATGGGCTCTTCTCGGCTTATGGACCTCAAATTGCGGGACGTATAATGCTTCCAATTAACATGACAACCGATGATGGACCAACTTACGTAAATGCTAAGCAGTACCATGGAATCATCAGACGTCGGCAATCCCGTGCAAAAGCTGTTCTAGAGAATAAATTGATAAAACGTCGCAAGCCATATATGCATGAATCACGCCATCTACATGCGCTGCGGCGGCCAAGAGGATGCGGTGGTCGCTTCTTGAACACAAAAAATTCTACTGATGGAAATGGTAAAAATGAAAGTGAAGTGAATGAAACCGGCAGCAGACAATTTCGGACCAGTGCCTCTCAGAGTTCTGAAGTCCTCCAATCCGAGGTTGGAACTTTAAATTCATCAAAGGAGACAAATCGAAGCAGTCCAAACATCTCTGGTTCAGAGGTGACTAGCATGTATTCACGGGAAGGTTTCGATGGCTTTTCTGTCAATCCTCTTGGACCTTCCGTCCACTCTCTAGTGGACATGATCGGAAGTGGGCATGGTATTATCATGCCTACTAAATGGGTTGCAGCAGTACCAGTGGGCTTGGTGTGTGCAATGCTGCACCAAACCCATCCTTGCAAACAACCAGATGAAGAAGTTCTGTTGCAGTTTCTTGTGTTTATTGCGATAAATTTCGTTCAGGAGGCTTGCCTCCTCATC 1089 0.4426 MAMQTVYLKEHEGIVHNSVGQLSSVTSAPWWSAFGSQPVYGEYCGQMKPFSLEISNYVDQFGAGKQAVRGVEQLLDKGHTTQFTIVPDDYKMSGDAQNPQATLSLQSSLAEPHNRFEIGFNQPMICAKYPYMDQFYGLFSAYGPQIAGRIMLPINMTTDDGPTYVNAKQYHGIIRRRQSRAKAVLENKLIKRRKPYMHESRHLHALRRPRGCGGRFLNTKNSTDGNGKNESEVNETGSRQFRTSASQSSEVLQSEVGTLNSSKETNRSSPNISGSEVTSMYSREGFDGFSVNPLGPSVHSLVDMIGSGHGIIMPTKWVAAVPVGLVCAMLHQTHPCKQPDEEVLLQFLVFIAINFVQEACLLI 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6938g00001 363 MobiDBLite consensus disorder prediction 208 277 - -
Mupr6938g00001 363 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 162 216 IPR001289 GO:0003700|GO:0006355
Mupr6938g00001 363 PRINTS CCAAT-binding transcription factor subunit B signature 162 184 IPR001289 GO:0003700|GO:0006355
Mupr6938g00001 363 PRINTS CCAAT-binding transcription factor subunit B signature 193 216 IPR001289 GO:0003700|GO:0006355
Mupr6938g00001 363 ProSiteProfiles NF-YA/HAP2 family profile. 159 219 IPR001289 GO:0003700|GO:0006355
Mupr6938g00001 363 SMART cbf3 158 219 IPR001289 GO:0003700|GO:0006355
Mupr6938g00001 363 MobiDBLite consensus disorder prediction 216 277 - -
Mupr6938g00001 363 Gene3D - 159 221 - -
Mupr6938g00001 363 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 82 282 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6938g00001 Mupr-Chr6938 10415 15215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6938g00001 1 321 CCAAT-HAP2 Transcription Factor Family AT3G05690 43.155 3.80e-60 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mupr6938g00001 CBFB_NFYA 1.3e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6938g00001 K08064 - gmx:100808195 598.201