Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr6934g00002 ATGGAGAAGGGTCAATGTTTGATGTGGAGTAAGAGAAAGTATTCTATGAGCTCTAGTCTTGATTCACCTACTAATTACCCCTCCTCCTATGATGACCACTCATGGGAAGAACAAGCCTTTGCAAAAGATGCAGCTTGGTCTGGTTGCATATGGCCACCACGATCATATTCTTGTAGCTTTTGCAGAAGGGAATTTAGGTCAGCACAGGCTTTAGGTGGCCACATGAATGTTCATAGAAGAGATAGAGCAAGACTAAAGCAGCCATATAGCCCCCAGCATGAAATCCTCAGTGATGATGTTGAGAAAACTCAACCCCAGAATTCAGTTCAAATTTCTTTTACTTCTTTGGGTTATCTATACCCATCTTCTCCTAGCGGATTGGCTCCTAACACTAGCCCTAATTCTCATCCTTATTATTCTCATATTCCTGCTTCACCTTCCAAGGTTTTAGCCACATCAGTTAACAAGAGAAGCAGAGAGAAACCCCTGATTCCACTTCACAATAAGTCTTCTATTTTCAAAGGATGTCATGAGTCTTCCCCTTCTATTTCTTCTAAATCTTGGTCAAATTTAACTGAAGACTTTAGATTTCGTTCACGTAGGCTCGATCCTGCTGAGAAAATTTTGAAGGGATTGGATTCTGAGTGTAGGAGTGAGGGTGATGATGGTAAAACTGAAGTGGCTGTGAGCTTCCCACGTGTGCAGATTGAGACTAAAGAGACAGATACAAGTTTCAAGAAGAGGAAAGAAGATGCTTCATCCATTCCATTCTTCCCAAAGTCATGTTCAGTTGATAGGCATCGTGTGCAGTCACAGATGTTTGAATTTAGCCCTAGCTCCACAGAAGAGCTAGATCTGGAACTAAGGCTTGGATACAGGTCCGAGCTAGTCAAGTCTGCTGCATACATCGATGCAGGATGTGAGGTGATCGTAATGGGTACTTCTTTCTGA 951 0.4238 MEKGQCLMWSKRKYSMSSSLDSPTNYPSSYDDHSWEEQAFAKDAAWSGCIWPPRSYSCSFCRREFRSAQALGGHMNVHRRDRARLKQPYSPQHEILSDDVEKTQPQNSVQISFTSLGYLYPSSPSGLAPNTSPNSHPYYSHIPASPSKVLATSVNKRSREKPLIPLHNKSSIFKGCHESSPSISSKSWSNLTEDFRFRSRRLDPAEKILKGLDSECRSEGDDGKTEVAVSFPRVQIETKETDTSFKKRKEDASSIPFFPKSCSVDRHRVQSQMFEFSPSSTEELDLELRLGYRSELVKSAAYIDAGCEVIVMGTSF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr6934g00002 316 Pfam C2H2-type zinc finger 56 80 - -
Mupr6934g00002 316 ProSitePatterns Zinc finger C2H2 type domain signature. 58 78 IPR013087 -
Mupr6934g00002 316 SMART c2h2final6 56 78 IPR013087 -
Mupr6934g00002 316 ProSiteProfiles Zinc finger C2H2 type domain profile. 56 83 IPR013087 -
Mupr6934g00002 316 PANTHER OS07G0101800 PROTEIN 18 293 - -
Mupr6934g00002 316 SUPERFAMILY beta-beta-alpha zinc fingers 53 82 IPR036236 -
Mupr6934g00002 316 Gene3D Classic Zinc Finger 53 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr6934g00002 Mupr-Chr6934 3429 6007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr6934g00002 34 87 C2H2 Transcription Factor Family AT2G37740 83.333 1.29e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr6934g00002 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr6934g00002 - - vra:106758996 451.44