Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr6933g00001 | ATGGATATTGAGGAGGATATTCGTTCTTTACAGCTCGAGTCAGCAGAAGACAGTAATGGGGTGGTAAACCCAGAGGATGCAAAGCCAGAAGAAGTTGAGAAATCTGATAAGATGGACGAAGATCCAAAGCAGGATGTTCAGGCACCGGCTGTTGAGCCTGAGCCAAAAGTGAAAGATAAGGAGATTCCTTCTGTTCAAGATGAAGAAAATGAACTGGAGATGACGAAAAGACATTTGAATGTTGTGTTTATTGGCCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATACTTTTCCTCAGTGGTCAAGTTGATGAACGGACTATCCAAAAATATGAGAAAGAGGCTAAGGACAAAAGTCGAGAAAGCTGGTATATGGCTTATATAATGGACACAAATGAGGAGGAGAGGGTAAAGGGAAAGACAGTTGAAGTTGGAAGAGCACATTTTGAGACAGAAACGACAAGGTTTACTATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCTAACATGATTAGTGGTGCATCTCAAGCTGATATTGGAGTGTTGGTTATTTCTGCTCGGAAGGGAGAGTTTGAAACTGGATATGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTTGCGAAAACGCTGGGTGTGGCTAAGCTTCTTGTTGTTGTCAATAAAATGGACGAGCCTACAGTGCAGTGGTCAAAAGAAAGGTTCTCTCACTCTCTTGCTATACACACACAGACACTCTTTCTGTGCTTATATGCAATTTTAATGAGACTCCTTGCTGCTGGTGTGCCTCTAGATGTCTTGTTTTTACCAATATCCGGTTTGATGGGTGCAAACATGAAAACAAGAGTGGATAAAAGCGTTTGTCCATGGTGGAATGGACCTTGCTTATTTGAGGCCCTTGATGGTATTGAAGTTCCATTGCGAGATCCCAAAGGTCCTTTCAGGATGCCTATTATTGACAAATTCAAAGATATGGGGACTGTTGTTATGGGCAAAGTTGAATCTGGTTCTGTTCGAGAGGGAGATTCCTTGTTGGTCATGCCGAATAAGGATCAAGTAAAAGTTGTTGCAATATTCATTGATGAAGATCGTGTTAAACGTGCTGGACCTGGTGAAAATTTACGAATTAGATTATCTGGTGTTGAAGAAGAAGACATTGTATCTGGGTTTGTCCTGTCTAGTGTTGCTAATCCAGTACCAGCAGTTACTGAATTTATTGCTCAGTTGGTGATCCTTGAATTGCTAGACAACGCTATTTTTACTGCTGGGTACAAGGCTGTTCTGCACATCCACTCTGTGGTTGAGGAATGTGAAATTGTTGAACTTTTACAGCAAATTGATACAAAGACAAAGAAGCCTATGAAAAAGAAAGTACTCTTTGTGAAGAATGGTGCTGTTGTAGTGTGCCGTGTTCAGGTCAGTAACTCTATTTGCATTGAGAAGTTTTCTGACTTTCCACAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCTGTGGGAAAAGTCACTGGACTGTGA | 1536 | 0.4186 | MDIEEDIRSLQLESAEDSNGVVNPEDAKPEEVEKSDKMDEDPKQDVQAPAVEPEPKVKDKEIPSVQDEENELEMTKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDEPTVQWSKERFSHSLAIHTQTLFLCLYAILMRLLAAGVPLDVLFLPISGLMGANMKTRVDKSVCPWWNGPCLFEALDGIEVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLLVMPNKDQVKVVAIFIDEDRVKRAGPGENLRIRLSGVEEEDIVSGFVLSSVANPVPAVTEFIAQLVILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDTKTKKPMKKKVLFVKNGAVVVCRVQVSNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGL | 511 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr6933g00001 | 511 | MobiDBLite | consensus disorder prediction | 1 | 69 | - | - | |
| Mupr6933g00001 | 511 | Pfam | Elongation factor Tu C-terminal domain | 402 | 510 | IPR004160 | - | |
| Mupr6933g00001 | 511 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 76 | 314 | IPR000795 | GO:0003924|GO:0005525 | |
| Mupr6933g00001 | 511 | FunFam | Putative translation elongation/initiation factor family protein | 403 | 511 | - | - | |
| Mupr6933g00001 | 511 | FunFam | Eukaryotic peptide chain release factor GTP-binding subunit ERF3A | 56 | 309 | - | - | |
| Mupr6933g00001 | 511 | Pfam | Elongation factor Tu domain 2 | 329 | 395 | IPR004161 | GO:0005525 | |
| Mupr6933g00001 | 511 | CDD | eRF3_II | 316 | 397 | - | - | |
| Mupr6933g00001 | 511 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 405 | 510 | IPR009001 | - | |
| Mupr6933g00001 | 511 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 132 | 147 | IPR031157 | - | |
| Mupr6933g00001 | 511 | PRINTS | GTP-binding elongation factor signature | 175 | 186 | IPR000795 | GO:0003924|GO:0005525 | |
| Mupr6933g00001 | 511 | PRINTS | GTP-binding elongation factor signature | 219 | 228 | IPR000795 | GO:0003924|GO:0005525 | |
| Mupr6933g00001 | 511 | PRINTS | GTP-binding elongation factor signature | 159 | 169 | IPR000795 | GO:0003924|GO:0005525 | |
| Mupr6933g00001 | 511 | PRINTS | GTP-binding elongation factor signature | 80 | 93 | IPR000795 | GO:0003924|GO:0005525 | |
| Mupr6933g00001 | 511 | CDD | EF1_alpha | 80 | 309 | - | - | |
| Mupr6933g00001 | 511 | Pfam | Elongation factor Tu GTP binding domain | 76 | 284 | IPR000795 | GO:0003924|GO:0005525 | |
| Mupr6933g00001 | 511 | PANTHER | TRANSLATION FACTOR | 69 | 509 | - | - | |
| Mupr6933g00001 | 511 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 70 | 320 | IPR027417 | - | |
| Mupr6933g00001 | 511 | Gene3D | Translation factors | 314 | 399 | - | - | |
| Mupr6933g00001 | 511 | MobiDBLite | consensus disorder prediction | 23 | 69 | - | - | |
| Mupr6933g00001 | 511 | Gene3D | - | 57 | 309 | IPR027417 | - | |
| Mupr6933g00001 | 511 | Gene3D | Translation factors | 404 | 511 | - | - | |
| Mupr6933g00001 | 511 | FunFam | Eukaryotic peptide chain release factor GTP-binding subunit ERF3A | 313 | 399 | - | - | |
| Mupr6933g00001 | 511 | SUPERFAMILY | Translation proteins | 308 | 401 | IPR009000 | - | |
| Mupr6933g00001 | 511 | CDD | eRF3_C_III | 403 | 511 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr6933g00001 | Mupr-Chr6933 | 1376 | 10354 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr6933g00001 | 76 | 506 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 35.714 | 2.80e-88 | 276 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr6933g00001 | K03267 | - | gmx:100793653 | 893.264 |